Analysis of interatomic Contacts of Structural Units in PDB entry:
4FP1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FP1 entry

There are 2 chains in PDB entry 4FP1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3VAL 359
B
 GLU 3VAL 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4FP1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 57Right-handed 310
Helix 2
2
A
58 74Right-handed alpha
Helix 3
3
A
79 91Right-handed alpha
Helix 4
4
A
97 119Right-handed alpha
Helix 5
5
A
122 127Right-handed alpha
Helix 6
6
A
143 158Right-handed alpha
Helix 7
7
A
171 187Right-handed alpha
Helix 8
8
A
201 215Right-handed alpha
Helix 9
9
A
228 237Right-handed alpha
Helix 10
10
A
251 261Right-handed alpha
Helix 11
11
A
275 291Right-handed alpha
Helix 12
12
A
299 309Right-handed alpha
Helix 13
13
A
350 358Right-handed alpha
Helix 14
14
B
55 57Right-handed 310
Helix 15
15
B
58 74Right-handed alpha
Helix 16
16
B
79 91Right-handed alpha
Helix 17
17
B
97 119Right-handed alpha
Helix 18
18
B
122 127Right-handed alpha
Helix 19
19
B
143 158Right-handed alpha
Helix 20
20
B
171 187Right-handed alpha
Helix 21
21
B
201 216Right-handed alpha
Helix 22
22
B
228 238Right-handed alpha
Helix 23
23
B
251 261Right-handed alpha
Helix 24
24
B
275 291Right-handed alpha
Helix 25
25
B
299 309Right-handed alpha
Helix 26
26
B
350 355Right-handed alpha
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There are 8 sheets in PDB entry 4FP1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 16first strand
Strand 2
A
32 41anti-parallel
Strand 3
A
46 52anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
27 29anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
243 245parallel
Strand 3
A
220 221parallel
Strand 4
A
191 195parallel
Strand 5
A
162 166parallel
Strand 6
A
134 139parallel
Strand 7
A
316 318parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
243 245parallel
Strand 3
A
220 221parallel
Strand 4
A
191 195parallel
Strand 5
A
162 166parallel
Strand 6
A
134 139parallel
Strand 7
A
336 338anti-parallel
Strand 8
A
331 333anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 16first strand
Strand 2
B
32 41anti-parallel
Strand 3
B
46 52anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
27 29anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
243 245parallel
Strand 3
B
220 221parallel
Strand 4
B
191 195parallel
Strand 5
B
162 166parallel
Strand 6
B
134 139parallel
Strand 7
B
316 318parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
243 245parallel
Strand 3
B
220 221parallel
Strand 4
B
191 195parallel
Strand 5
B
162 166parallel
Strand 6
B
134 139parallel
Strand 7
B
336 338anti-parallel
Strand 8
B
331 333anti-parallel
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