Analysis of interatomic Contacts of Structural Units in PDB entry:
4FP9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4FP9 entry

There are 5 chains in PDB entry 4FP9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 39	THR 384
B	THR 83	SER 327
C	PRO 39	THR 384
D	PRO 39	THR 384
E	THR 83	GLU 91

There are148 helices in PDB entry 4FP9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	39	57	Right-handed alpha
Helix 2	2	A	59	68	Right-handed alpha
Helix 3	3	A	79	81	Right-handed 310
Helix 4	4	A	82	92	Right-handed alpha
Helix 5	5	A	98	105	Right-handed alpha
Helix 6	6	A	120	125	Right-handed alpha
Helix 7	7	A	159	162	Right-handed 310
Helix 8	8	A	163	170	Right-handed alpha
Helix 9	9	A	185	194	Right-handed alpha
Helix 10	10	A	206	221	Right-handed alpha
Helix 11	11	A	222	227	Right-handed alpha
Helix 12	12	A	237	243	Right-handed 310
Helix 13	13	A	260	265	Right-handed alpha
Helix 14	14	A	274	276	Right-handed 310
Helix 15	15	A	277	283	Right-handed alpha
Helix 16	16	A	283	298	Right-handed alpha
Helix 17	17	A	317	332	Right-handed alpha
Helix 18	18	A	341	349	Right-handed alpha
Helix 19	19	A	367	371	Right-handed 310
Helix 20	20	B	84	102	Right-handed alpha
Helix 21	21	B	105	116	Right-handed alpha
Helix 22	22	B	120	134	Right-handed alpha
Helix 23	23	B	137	148	Right-handed alpha
Helix 24	24	B	149	154	Right-handed 310
Helix 25	25	B	155	169	Right-handed alpha
Helix 26	26	B	175	183	Right-handed alpha
Helix 27	27	B	184	188	Right-handed 310
Helix 28	28	B	190	204	Right-handed alpha
Helix 29	29	B	208	219	Right-handed alpha
Helix 30	30	B	220	224	Right-handed 310
Helix 31	31	B	226	239	Right-handed alpha
Helix 32	32	B	244	251	Right-handed alpha
Helix 33	33	B	252	256	Right-handed 310
Helix 34	34	B	257	272	Right-handed alpha
Helix 35	35	B	289	294	Right-handed alpha
Helix 36	36	B	297	305	Right-handed alpha
Helix 37	37	B	309	326	Right-handed alpha
Helix 38	38	C	40	57	Right-handed alpha
Helix 39	39	C	59	68	Right-handed alpha
Helix 40	40	C	79	81	Right-handed 310
Helix 41	41	C	82	92	Right-handed alpha
Helix 42	42	C	98	105	Right-handed alpha
Helix 43	43	C	120	125	Right-handed alpha
Helix 44	44	C	159	162	Right-handed 310
Helix 45	45	C	163	170	Right-handed alpha
Helix 46	46	C	185	194	Right-handed alpha
Helix 47	47	C	206	221	Right-handed alpha
Helix 48	48	C	222	227	Right-handed alpha
Helix 49	49	C	237	243	Right-handed 310
Helix 50	50	C	262	266	Right-handed 310
Helix 51	51	C	274	276	Right-handed 310
Helix 52	52	C	277	283	Right-handed alpha
Helix 53	53	C	283	298	Right-handed alpha
Helix 54	54	C	317	332	Right-handed alpha
Helix 55	55	C	341	349	Right-handed alpha
Helix 56	56	C	367	371	Right-handed 310
Helix 57	57	D	40	57	Right-handed alpha
Helix 58	58	D	59	68	Right-handed alpha
Helix 59	59	D	79	81	Right-handed 310
Helix 60	60	D	82	92	Right-handed alpha
Helix 61	61	D	98	105	Right-handed alpha
Helix 62	62	D	159	162	Right-handed 310
Helix 63	63	D	163	170	Right-handed alpha
Helix 64	64	D	185	194	Right-handed alpha
Helix 65	65	D	206	221	Right-handed alpha
Helix 66	66	D	222	227	Right-handed alpha
Helix 67	67	D	237	243	Right-handed 310
Helix 68	68	D	260	265	Right-handed alpha
Helix 69	69	D	274	276	Right-handed 310
Helix 70	70	D	277	283	Right-handed alpha
Helix 71	71	D	283	298	Right-handed alpha
Helix 72	72	D	317	332	Right-handed alpha
Helix 73	73	D	341	349	Right-handed alpha
Helix 74	74	D	367	371	Right-handed 310
Helix 75	75	E	84	102	Right-handed alpha
Helix 76	76	E	105	116	Right-handed alpha
Helix 77	77	E	120	134	Right-handed alpha
Helix 78	78	E	137	148	Right-handed alpha
Helix 79	79	E	149	154	Right-handed 310
Helix 80	80	E	155	169	Right-handed alpha
Helix 81	81	E	175	183	Right-handed alpha
Helix 82	82	E	184	188	Right-handed 310
Helix 83	83	E	190	204	Right-handed alpha
Helix 84	84	E	208	219	Right-handed alpha
Helix 85	85	E	220	224	Right-handed 310
Helix 86	86	E	226	239	Right-handed alpha
Helix 87	87	E	244	251	Right-handed alpha
Helix 88	88	E	252	256	Right-handed 310
Helix 89	89	E	257	272	Right-handed alpha
Helix 90	90	E	289	294	Right-handed alpha
Helix 91	91	E	297	305	Right-handed alpha
Helix 92	92	E	309	326	Right-handed alpha
Helix 93	93	F	40	57	Right-handed alpha
Helix 94	94	F	59	68	Right-handed alpha
Helix 95	95	F	79	81	Right-handed 310
Helix 96	96	F	82	92	Right-handed alpha
Helix 97	97	F	98	105	Right-handed alpha
Helix 98	98	F	120	125	Right-handed alpha
Helix 99	99	F	159	162	Right-handed 310
Helix 100	100	F	163	170	Right-handed alpha
Helix 101	101	F	185	194	Right-handed alpha
Helix 102	102	F	206	221	Right-handed alpha
Helix 103	103	F	222	227	Right-handed alpha
Helix 104	104	F	237	243	Right-handed 310
Helix 105	105	F	260	265	Right-handed alpha
Helix 106	106	F	274	276	Right-handed 310
Helix 107	107	F	277	283	Right-handed alpha
Helix 108	108	F	283	298	Right-handed alpha
Helix 109	109	F	317	332	Right-handed alpha
Helix 110	110	F	341	349	Right-handed alpha
Helix 111	111	F	367	371	Right-handed 310
Helix 112	112	G	84	103	Right-handed alpha
Helix 113	113	G	105	108	Right-handed 310
Helix 114	114	G	109	116	Right-handed alpha
Helix 115	115	G	120	134	Right-handed alpha
Helix 116	116	G	137	148	Right-handed alpha
Helix 117	117	G	149	154	Right-handed 310
Helix 118	118	G	155	169	Right-handed alpha
Helix 119	119	G	176	183	Right-handed alpha
Helix 120	120	G	184	187	Right-handed 310
Helix 121	121	G	190	204	Right-handed alpha
Helix 122	122	G	208	219	Right-handed alpha
Helix 123	123	G	220	223	Right-handed 310
Helix 124	124	G	226	239	Right-handed alpha
Helix 125	125	G	244	251	Right-handed alpha
Helix 126	126	G	252	256	Right-handed 310
Helix 127	127	G	257	272	Right-handed alpha
Helix 128	128	G	289	294	Right-handed alpha
Helix 129	129	G	297	305	Right-handed alpha
Helix 130	130	G	309	326	Right-handed alpha
Helix 131	131	H	84	98	Right-handed alpha
Helix 132	132	H	105	116	Right-handed alpha
Helix 133	133	H	120	134	Right-handed alpha
Helix 134	134	H	137	148	Right-handed alpha
Helix 135	135	H	149	153	Right-handed 310
Helix 136	136	H	155	168	Right-handed alpha
Helix 137	137	H	175	183	Right-handed alpha
Helix 138	138	H	184	188	Right-handed 310
Helix 139	139	H	190	204	Right-handed alpha
Helix 140	140	H	208	219	Right-handed alpha
Helix 141	141	H	220	224	Right-handed 310
Helix 142	142	H	226	239	Right-handed alpha
Helix 143	143	H	244	251	Right-handed alpha
Helix 144	144	H	252	256	Right-handed 310
Helix 145	145	H	257	272	Right-handed alpha
Helix 146	146	H	289	294	Right-handed alpha
Helix 147	147	H	297	305	Right-handed alpha
Helix 148	148	H	309	326	Right-handed alpha

There are 12 sheets in PDB entry 4FP9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	97	first strand
Strand 2	A	131	133	anti-parallel
Strand 3	A	74	77	anti-parallel
Strand 4	A	155	158	anti-parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	234	first strand
Strand 2	A	197	203	parallel
Strand 3	A	175	179	parallel
Strand 4	A	249	255	parallel
Strand 5	A	299	309	parallel
Strand 6	A	375	382	anti-parallel
Strand 7	A	336	338	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	234	first strand
Strand 2	A	197	203	parallel
Strand 3	A	175	179	parallel
Strand 4	A	249	255	parallel
Strand 5	A	299	309	parallel
Strand 6	A	375	382	anti-parallel
Strand 7	A	362	364	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	97	first strand
Strand 2	C	131	133	anti-parallel
Strand 3	C	74	77	anti-parallel
Strand 4	C	155	158	anti-parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	234	first strand
Strand 2	C	197	203	parallel
Strand 3	C	175	179	parallel
Strand 4	C	249	255	parallel
Strand 5	C	299	309	parallel
Strand 6	C	375	382	anti-parallel
Strand 7	C	336	338	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	234	first strand
Strand 2	C	197	203	parallel
Strand 3	C	175	179	parallel
Strand 4	C	249	255	parallel
Strand 5	C	299	309	parallel
Strand 6	C	375	382	anti-parallel
Strand 7	C	362	364	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	97	first strand
Strand 2	D	131	133	anti-parallel
Strand 3	D	74	77	anti-parallel
Strand 4	D	155	158	anti-parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	231	234	first strand
Strand 2	D	197	203	parallel
Strand 3	D	175	179	parallel
Strand 4	D	249	255	parallel
Strand 5	D	299	309	parallel
Strand 6	D	375	382	anti-parallel
Strand 7	D	336	338	anti-parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	231	234	first strand
Strand 2	D	197	203	parallel
Strand 3	D	175	179	parallel
Strand 4	D	249	255	parallel
Strand 5	D	299	309	parallel
Strand 6	D	375	382	anti-parallel
Strand 7	D	362	364	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	96	97	first strand
Strand 2	F	131	133	anti-parallel
Strand 3	F	74	77	anti-parallel
Strand 4	F	155	158	anti-parallel

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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	231	234	first strand
Strand 2	F	197	203	parallel
Strand 3	F	175	179	parallel
Strand 4	F	249	255	parallel
Strand 5	F	299	309	parallel
Strand 6	F	375	382	anti-parallel
Strand 7	F	336	338	anti-parallel

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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	231	234	first strand
Strand 2	F	197	203	parallel
Strand 3	F	175	179	parallel
Strand 4	F	249	255	parallel
Strand 5	F	299	309	parallel
Strand 6	F	375	382	anti-parallel
Strand 7	F	362	364	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4FP9

Analysis of interatomic Contacts of Structural Units in PDB entry:
4FP9