Analysis of interatomic Contacts of Structural Units in PDB entry:
4FPA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FPA entry

There are 2 chains in PDB entry 4FPA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 16GLU 914
B
 ASP 16GLU 914
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 72 helices in PDB entry 4FPA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
27 30Right-handed 310
Helix 3
3
A
32 52Right-handed alpha
Helix 4
4
A
115 121Right-handed alpha
Helix 5
5
A
122 142Right-handed alpha
Helix 6
6
A
184 197Right-handed alpha
Helix 7
7
A
208 219Right-handed alpha
Helix 8
8
A
243 245Right-handed 310
Helix 9
9
A
260 264Right-handed 310
Helix 10
10
A
275 284Right-handed alpha
Helix 11
11
A
293 297Right-handed 310
Helix 12
12
A
301 316Right-handed alpha
Helix 13
13
A
325 330Right-handed alpha
Helix 14
14
A
335 344Right-handed alpha
Helix 15
15
A
347 359Right-handed alpha
Helix 16
16
A
364 402Right-handed alpha
Helix 17
17
A
414 420Right-handed alpha
Helix 18
18
A
422 435Right-handed alpha
Helix 19
19
A
449 476Right-handed alpha
Helix 20
20
A
480 500Right-handed alpha
Helix 21
21
A
563 568Right-handed alpha
Helix 22
22
A
570 590Right-handed alpha
Helix 23
23
A
632 645Right-handed alpha
Helix 24
24
A
656 667Right-handed alpha
Helix 25
25
A
708 712Right-handed 310
Helix 26
26
A
723 732Right-handed alpha
Helix 27
27
A
741 745Right-handed 310
Helix 28
28
A
746 764Right-handed alpha
Helix 29
29
A
767 771Right-handed 310
Helix 30
30
A
783 791Right-handed alpha
Helix 31
31
A
796 808Right-handed alpha
Helix 32
32
A
812 849Right-handed alpha
Helix 33
33
A
862 868Right-handed alpha
Helix 34
34
A
870 883Right-handed alpha
Helix 35
35
A
897 913Right-handed alpha
Helix 36
36
B
17 26Right-handed alpha
Helix 37
37
B
27 30Right-handed 310
Helix 38
38
B
32 52Right-handed alpha
Helix 39
39
B
55 59Right-handed 310
Helix 40
40
B
99 102Right-handed 310
Helix 41
41
B
115 121Right-handed alpha
Helix 42
42
B
122 141Right-handed alpha
Helix 43
43
B
184 195Right-handed alpha
Helix 44
44
B
208 221Right-handed alpha
Helix 45
45
B
260 264Right-handed 310
Helix 46
46
B
275 284Right-handed alpha
Helix 47
47
B
293 297Right-handed 310
Helix 48
48
B
298 316Right-handed alpha
Helix 49
49
B
319 323Right-handed 310
Helix 50
50
B
335 342Right-handed alpha
Helix 51
51
B
347 359Right-handed alpha
Helix 52
52
B
364 402Right-handed alpha
Helix 53
53
B
414 420Right-handed alpha
Helix 54
54
B
422 435Right-handed alpha
Helix 55
55
B
449 476Right-handed alpha
Helix 56
56
B
480 500Right-handed alpha
Helix 57
57
B
503 507Right-handed 310
Helix 58
58
B
563 568Right-handed alpha
Helix 59
59
B
570 589Right-handed alpha
Helix 60
60
B
632 643Right-handed alpha
Helix 61
61
B
656 667Right-handed alpha
Helix 62
62
B
708 712Right-handed 310
Helix 63
63
B
723 732Right-handed alpha
Helix 64
64
B
741 745Right-handed 310
Helix 65
65
B
749 764Right-handed alpha
Helix 66
66
B
767 771Right-handed 310
Helix 67
67
B
783 791Right-handed alpha
Helix 68
68
B
796 806Right-handed alpha
Helix 69
69
B
812 849Right-handed alpha
Helix 70
70
B
862 868Right-handed alpha
Helix 71
71
B
870 883Right-handed alpha
Helix 72
72
B
897 914Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 4FPA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
234 241anti-parallel
Strand 4
A
224 230anti-parallel
Strand 5
A
409 413parallel
Strand 6
A
441 444parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 112first strand
Strand 2
A
90 98anti-parallel
Strand 3
A
78 85anti-parallel
Strand 4
A
149 154parallel
Strand 5
A
202 207parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
167 168anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 513first strand
Strand 2
A
702 706anti-parallel
Strand 3
A
682 689anti-parallel
Strand 4
A
672 678anti-parallel
Strand 5
A
854 861parallel
Strand 6
A
886 892parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
552 559first strand
Strand 2
A
539 546anti-parallel
Strand 3
A
526 533anti-parallel
Strand 4
A
596 602parallel
Strand 5
A
649 655parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 610first strand
Strand 2
A
613 616anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
254 258anti-parallel
Strand 3
B
234 241anti-parallel
Strand 4
B
224 230anti-parallel
Strand 5
B
406 413parallel
Strand 6
B
438 444parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 112first strand
Strand 2
B
90 98anti-parallel
Strand 3
B
78 85anti-parallel
Strand 4
B
149 154parallel
Strand 5
B
202 207parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
167 168anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
512 513first strand
Strand 2
B
702 706anti-parallel
Strand 3
B
682 689anti-parallel
Strand 4
B
672 678anti-parallel
Strand 5
B
854 861parallel
Strand 6
B
886 892parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
552 560first strand
Strand 2
B
538 546anti-parallel
Strand 3
B
526 533anti-parallel
Strand 4
B
597 602parallel
Strand 5
B
650 655parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
606 610first strand
Strand 2
B
613 616anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il