Analysis of interatomic Contacts of Structural Units in PDB entry:
4FQ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FQ7 entry

There are 2 chains in PDB entry 4FQ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5TYR 252
B
 LYS 5TYR 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4FQ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 32Right-handed alpha
Helix 2
2
A
52 62Right-handed alpha
Helix 3
3
A
62 72Right-handed alpha
Helix 4
4
A
82 88Right-handed alpha
Helix 5
5
A
92 107Right-handed alpha
Helix 6
6
A
117 128Right-handed alpha
Helix 7
7
A
140 154Right-handed alpha
Helix 8
8
A
168 174Right-handed alpha
Helix 9
9
A
178 185Right-handed alpha
Helix 10
10
A
208 217Right-handed alpha
Helix 11
11
A
223 235Right-handed alpha
Helix 12
12
A
245 249Right-handed 310
Helix 13
13
B
19 32Right-handed alpha
Helix 14
14
B
52 62Right-handed alpha
Helix 15
15
B
62 72Right-handed alpha
Helix 16
16
B
82 88Right-handed alpha
Helix 17
17
B
92 107Right-handed alpha
Helix 18
18
B
117 128Right-handed alpha
Helix 19
19
B
140 154Right-handed alpha
Helix 20
20
B
168 174Right-handed alpha
Helix 21
21
B
178 186Right-handed alpha
Helix 22
22
B
205 207Right-handed 310
Helix 23
23
B
208 217Right-handed alpha
Helix 24
24
B
223 235Right-handed alpha
Helix 25
25
B
245 249Right-handed 310
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There are 4 sheets in PDB entry 4FQ7. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 46first strand
Strand 2
A
6 14parallel
Strand 3
A
77 80parallel
Strand 4
A
114 116parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 163first strand
Strand 2
A
132 137parallel
Strand 3
A
194 198parallel
Strand 4
A
220 222parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 46first strand
Strand 2
B
6 14parallel
Strand 3
B
77 80parallel
Strand 4
B
114 116parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 163first strand
Strand 2
B
132 137parallel
Strand 3
B
194 198parallel
Strand 4
B
220 222parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il