Analysis of interatomic Contacts of Structural Units in PDB entry:
4FSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FSJ entry

There are 7 chains in PDB entry 4FSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21ASN 363
D
 ALA 364ALA 381
B
 ALA 55ASN 363
E
 ALA 364ALA 380
C
 ALA 55ASN 363
F
 ALA 364SER 382
R
 U 2 U 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 4FSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 72Right-handed alpha
Helix 2
2
A
147 153Right-handed alpha
Helix 3
3
A
158 161Right-handed 310
Helix 4
4
A
219 225Right-handed 310
Helix 5
5
A
236 238Right-handed 310
Helix 6
6
A
268 273Right-handed alpha
Helix 7
7
A
329 333Right-handed 310
Helix 8
8
A
340 354Right-handed alpha
Helix 9
9
A
359 363Right-handed 310
Helix 10
10
D
366 378Right-handed alpha
Helix 11
11
B
60 72Right-handed alpha
Helix 12
12
B
148 153Right-handed alpha
Helix 13
13
B
219 225Right-handed 310
Helix 14
14
B
236 238Right-handed 310
Helix 15
15
B
268 273Right-handed alpha
Helix 16
16
B
329 333Right-handed 310
Helix 17
17
B
340 354Right-handed alpha
Helix 18
18
E
366 377Right-handed alpha
Helix 19
19
C
60 72Right-handed alpha
Helix 20
20
C
73 76Right-handed 310
Helix 21
21
C
148 153Right-handed alpha
Helix 22
22
C
158 161Right-handed 310
Helix 23
23
C
219 225Right-handed 310
Helix 24
24
C
236 238Right-handed 310
Helix 25
25
C
327 333Right-handed 310
Helix 26
26
C
340 354Right-handed alpha
Helix 27
27
F
365 381Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 4FSJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 243first strand
Strand 2
A
163 177anti-parallel
Strand 3
A
253 254anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 243first strand
Strand 2
A
163 177anti-parallel
Strand 3
A
309 323anti-parallel
Strand 4
A
91 105anti-parallel
Strand 5
A
334 335anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
187 193anti-parallel
Strand 3
A
296 303anti-parallel
Strand 4
A
109 115anti-parallel
Strand 5
A
121 129anti-parallel
Strand 6
A
139 144anti-parallel
Strand 7
A
277 279parallel
Strand 8
A
261 262anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 204first strand
Strand 2
A
210 218anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 243first strand
Strand 2
B
171 177anti-parallel
Strand 3
B
309 323anti-parallel
Strand 4
B
163 168anti-parallel
Strand 5
B
253 254anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 243first strand
Strand 2
B
171 177anti-parallel
Strand 3
B
309 323anti-parallel
Strand 4
B
91 105anti-parallel
Strand 5
B
334 335anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
187 193anti-parallel
Strand 3
B
296 303anti-parallel
Strand 4
B
109 115anti-parallel
Strand 5
B
121 129anti-parallel
Strand 6
B
139 144anti-parallel
Strand 7
B
277 279parallel
Strand 8
B
261 262anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 204first strand
Strand 2
B
210 218anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
239 243first strand
Strand 2
C
171 177anti-parallel
Strand 3
C
309 323anti-parallel
Strand 4
C
163 168anti-parallel
Strand 5
C
253 254anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
239 243first strand
Strand 2
C
171 177anti-parallel
Strand 3
C
309 323anti-parallel
Strand 4
C
91 105anti-parallel
Strand 5
C
334 335anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
231 234first strand
Strand 2
C
187 193anti-parallel
Strand 3
C
296 302anti-parallel
Strand 4
C
109 118anti-parallel
Strand 5
C
121 129anti-parallel
Strand 6
C
139 144anti-parallel
Strand 7
C
277 279parallel
Strand 8
C
261 262anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
196 204first strand
Strand 2
C
210 218anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il