Analysis of interatomic Contacts of Structural Units in PDB entry:
4FSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FSV entry

There is 1 chain in PDB entry 4FSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4LYS 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4FSV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 59Right-handed alpha
Helix 2
2
A
60 65Right-handed 310
Helix 3
3
A
70 74Right-handed 310
Helix 4
4
A
81 88Right-handed alpha
Helix 5
5
A
89 91Right-handed 310
Helix 6
6
A
116 137Right-handed alpha
Helix 7
7
A
152 167Right-handed alpha
Helix 8
8
A
176 184Right-handed alpha
Helix 9
9
A
232 253Right-handed alpha
Helix 10
10
A
259 278Right-handed alpha
Helix 11
11
A
302 309Right-handed alpha
Helix 12
12
A
309 316Right-handed alpha
Helix 13
13
A
316 328Right-handed alpha
Helix 14
14
A
330 334Right-handed 310
Helix 15
15
A
341 345Right-handed 310
Helix 16
16
A
346 357Right-handed alpha
Helix 17
17
A
370 385Right-handed alpha
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There are 6 sheets in PDB entry 4FSV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
16 23anti-parallel
Strand 3
A
39 40anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
16 23anti-parallel
Strand 3
A
7 11anti-parallel
Strand 4
A
142 147parallel
Strand 5
A
169 175parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
43 45anti-parallel
Strand 3
A
67 68anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 98first strand
Strand 2
A
101 108anti-parallel
Strand 3
A
111 115anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 228first strand
Strand 2
A
208 216anti-parallel
Strand 3
A
196 203anti-parallel
Strand 4
A
336 340parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 291first strand
Strand 2
A
294 301anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il