Analysis of interatomic Contacts of Structural Units in PDB entry:
4FVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FVR entry

There is 1 chain in PDB entry 4FVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 536PHE 809
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4FVR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
541 543Right-handed 310
Helix 2
2
A
569 571Right-handed 310
Helix 3
3
A
587 603Right-handed alpha
Helix 4
4
A
633 641Right-handed alpha
Helix 5
5
A
646 667Right-handed alpha
Helix 6
6
A
675 677Right-handed 310
Helix 7
7
A
708 715Right-handed alpha
Helix 8
8
A
720 726Right-handed alpha
Helix 9
9
A
727 730Right-handed 310
Helix 10
10
A
731 748Right-handed alpha
Helix 11
11
A
758 768Right-handed alpha
Helix 12
12
A
780 788Right-handed alpha
Helix 13
13
A
791 795Right-handed 310
Helix 14
14
A
797 808Right-handed alpha
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There are 2 sheets in PDB entry 4FVR. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
545 554first strand
Strand 2
A
557 567anti-parallel
Strand 3
A
573 584anti-parallel
Strand 4
A
621 627anti-parallel
Strand 5
A
612 616anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
679 683first strand
Strand 2
A
694 697anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il