Analysis of interatomic Contacts of Structural Units in PDB entry:
4FVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FVS entry

There are 6 chains in PDB entry 4FVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21LYS 234
B
 GLN 21LYS 234
C
 GLN 21LYS 234
D
 GLN 21LYS 234
E
 ASP 22LYS 234
F
 GLN 21THR 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4FVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
99 103Right-handed 310
Helix 2
2
A
104 109Right-handed alpha
Helix 3
3
B
99 103Right-handed 310
Helix 4
4
B
104 109Right-handed alpha
Helix 5
5
C
99 103Right-handed 310
Helix 6
6
C
104 110Right-handed alpha
Helix 7
7
D
99 103Right-handed 310
Helix 8
8
D
104 109Right-handed alpha
Helix 9
9
E
99 103Right-handed 310
Helix 10
10
E
104 109Right-handed alpha
Helix 11
11
F
99 103Right-handed 310
Helix 12
12
F
104 109Right-handed alpha
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There are 6 sheets in PDB entry 4FVS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 13 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
142 148anti-parallel
Strand 3
A
151 173anti-parallel
Strand 4
A
176 190anti-parallel
Strand 5
A
198 207anti-parallel
Strand 6
A
211 219anti-parallel
Strand 7
A
224 234anti-parallel
Strand 8
A
34 41anti-parallel
Strand 9
A
46 60anti-parallel
Strand 10
A
63 73anti-parallel
Strand 11
A
79 90anti-parallel
Strand 12
A
93 97anti-parallel
Strand 13
A
121 123anti-parallel
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There are 13 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 117first strand
Strand 2
B
144 148anti-parallel
Strand 3
B
151 173anti-parallel
Strand 4
B
176 190anti-parallel
Strand 5
B
198 207anti-parallel
Strand 6
B
211 219anti-parallel
Strand 7
B
224 234anti-parallel
Strand 8
B
34 41anti-parallel
Strand 9
B
46 60anti-parallel
Strand 10
B
63 73anti-parallel
Strand 11
B
79 90anti-parallel
Strand 12
B
93 97anti-parallel
Strand 13
B
121 123anti-parallel
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There are 13 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
115 117first strand
Strand 2
C
142 148anti-parallel
Strand 3
C
151 173anti-parallel
Strand 4
C
176 190anti-parallel
Strand 5
C
198 207anti-parallel
Strand 6
C
211 219anti-parallel
Strand 7
C
224 234anti-parallel
Strand 8
C
34 41anti-parallel
Strand 9
C
46 59anti-parallel
Strand 10
C
64 73anti-parallel
Strand 11
C
79 90anti-parallel
Strand 12
C
93 97anti-parallel
Strand 13
C
121 124anti-parallel
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There are 13 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
115 117first strand
Strand 2
D
144 148anti-parallel
Strand 3
D
151 173anti-parallel
Strand 4
D
176 190anti-parallel
Strand 5
D
197 207anti-parallel
Strand 6
D
211 219anti-parallel
Strand 7
D
224 234anti-parallel
Strand 8
D
34 41anti-parallel
Strand 9
D
46 60anti-parallel
Strand 10
D
63 73anti-parallel
Strand 11
D
79 90anti-parallel
Strand 12
D
93 97anti-parallel
Strand 13
D
121 123anti-parallel
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There are 13 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
115 117first strand
Strand 2
E
142 148anti-parallel
Strand 3
E
151 173anti-parallel
Strand 4
E
176 190anti-parallel
Strand 5
E
198 207anti-parallel
Strand 6
E
211 219anti-parallel
Strand 7
E
224 234anti-parallel
Strand 8
E
34 41anti-parallel
Strand 9
E
46 59anti-parallel
Strand 10
E
64 73anti-parallel
Strand 11
E
79 90anti-parallel
Strand 12
E
93 97anti-parallel
Strand 13
E
121 123anti-parallel
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There are 13 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
115 117first strand
Strand 2
F
142 148anti-parallel
Strand 3
F
151 173anti-parallel
Strand 4
F
176 190anti-parallel
Strand 5
F
198 207anti-parallel
Strand 6
F
211 219anti-parallel
Strand 7
F
224 234anti-parallel
Strand 8
F
34 41anti-parallel
Strand 9
F
46 59anti-parallel
Strand 10
F
64 73anti-parallel
Strand 11
F
79 90anti-parallel
Strand 12
F
93 97anti-parallel
Strand 13
F
121 123anti-parallel
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