Analysis of interatomic Contacts of Structural Units in PDB entry:
4FWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FWW entry

There is 1 chain in PDB entry 4FWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 42PRO 568
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4FWW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 106Right-handed alpha
Helix 2
2
A
138 141Right-handed 310
Helix 3
3
A
204 209Right-handed alpha
Helix 4
4
A
238 243Right-handed alpha
Helix 5
5
A
330 338Right-handed alpha
Helix 6
6
A
371 387Right-handed alpha
Helix 7
7
A
421 425Right-handed 310
Helix 8
8
A
526 530Right-handed 310
Helix 9
9
A
532 539Right-handed alpha
Helix 10
10
A
540 544Right-handed 310
Helix 11
11
A
554 558Right-handed 310
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There are 10 sheets in PDB entry 4FWW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
485 491parallel
Strand 3
A
470 475anti-parallel
Strand 4
A
459 466anti-parallel
Strand 5
A
448 456anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
516 521anti-parallel
Strand 3
A
508 513anti-parallel
Strand 4
A
503 505anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 62first strand
Strand 2
A
68 74anti-parallel
Strand 3
A
77 81anti-parallel
Strand 4
A
87 92anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 126first strand
Strand 2
A
131 136anti-parallel
Strand 3
A
143 151anti-parallel
Strand 4
A
154 157anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 126first strand
Strand 2
A
131 136anti-parallel
Strand 3
A
143 151anti-parallel
Strand 4
A
161 162anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 191first strand
Strand 2
A
194 201anti-parallel
Strand 3
A
216 220anti-parallel
Strand 4
A
233 235anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 255first strand
Strand 2
A
258 266anti-parallel
Strand 3
A
276 284anti-parallel
Strand 4
A
294 302anti-parallel
Strand 5
A
427 428parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 318first strand
Strand 2
A
294 302anti-parallel
Strand 3
A
433 436parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 328first strand
Strand 2
A
344 351anti-parallel
Strand 3
A
365 370anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 547first strand
Strand 2
A
552 553anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il