Analysis of interatomic Contacts of Structural Units in PDB entry:
4FZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FZ1 entry

There are 2 chains in PDB entry 4FZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 41LEU 450
D
 ASP 2PRO 38
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 4FZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 69Right-handed alpha
Helix 2
2
A
105 112Right-handed alpha
Helix 3
3
A
134 141Right-handed alpha
Helix 4
4
A
154 163Right-handed alpha
Helix 5
5
A
165 169Right-handed alpha
Helix 6
6
A
181 183Right-handed 310
Helix 7
7
A
226 230Right-handed 310
Helix 8
8
A
258 263Right-handed alpha
Helix 9
9
A
305 323Right-handed alpha
Helix 10
10
A
337 344Right-handed alpha
Helix 11
11
A
344 354Right-handed alpha
Helix 12
12
A
385 393Right-handed alpha
Helix 13
13
A
396 403Right-handed alpha
Helix 14
14
A
426 450Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 4FZ1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 82first strand
Strand 2
A
415 423anti-parallel
Strand 3
A
270 282parallel
Strand 4
A
404 411parallel
Strand 5
A
214 224anti-parallel
Strand 6
A
170 175anti-parallel
Strand 7
A
178 179anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 82first strand
Strand 2
A
415 423anti-parallel
Strand 3
A
270 282parallel
Strand 4
A
367 379anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
209 210anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 190first strand
Strand 2
A
193 198anti-parallel
Strand 3
A
90 95anti-parallel
Strand 4
A
246 251anti-parallel
Strand 5
A
264 266anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
21 24first strand
Strand 2
D
32 35anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il