Analysis of interatomic Contacts of Structural Units in PDB entry:
4FZH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4FZH entry

There are 3 chains in PDB entry 4FZH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 124	TRP 615
B	GLY 124	TRP 615
C	GLY 124	PHE 444

There are 29 helices in PDB entry 4FZH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	147	149	Right-handed 310
Helix 2	2	A	257	264	Right-handed alpha
Helix 3	3	A	287	292	Right-handed alpha
Helix 4	4	A	324	331	Right-handed alpha
Helix 5	5	A	347	359	Right-handed alpha
Helix 6	6	A	360	365	Right-handed 310
Helix 7	7	A	602	611	Right-handed alpha
Helix 8	8	B	147	149	Right-handed 310
Helix 9	9	B	257	263	Right-handed alpha
Helix 10	10	B	287	292	Right-handed alpha
Helix 11	11	B	324	331	Right-handed alpha
Helix 12	12	B	347	358	Right-handed alpha
Helix 13	13	B	359	360	Right-handed 310
Helix 14	14	B	361	365	Right-handed 310
Helix 15	15	B	603	610	Right-handed alpha
Helix 16	16	C	147	149	Right-handed 310
Helix 17	17	C	257	263	Right-handed alpha
Helix 18	18	C	287	292	Right-handed alpha
Helix 19	19	C	347	358	Right-handed alpha
Helix 20	20	C	359	360	Right-handed 310
Helix 21	21	C	361	365	Right-handed 310
Helix 22	22	C	603	611	Right-handed alpha
Helix 23	23	D	147	149	Right-handed 310
Helix 24	24	D	257	263	Right-handed alpha
Helix 25	25	D	287	293	Right-handed alpha
Helix 26	26	D	347	358	Right-handed alpha
Helix 27	27	D	359	360	Right-handed 310
Helix 28	28	D	361	365	Right-handed 310
Helix 29	29	D	602	612	Right-handed alpha

There are 35 sheets in PDB entry 4FZH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	474	478	parallel
Strand 3	A	484	492	anti-parallel
Strand 4	A	501	507	anti-parallel
Strand 5	A	515	516	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	557	567	anti-parallel
Strand 3	A	539	548	anti-parallel
Strand 4	A	524	534	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	180	first strand
Strand 2	A	185	192	anti-parallel
Strand 3	A	202	213	anti-parallel
Strand 4	A	219	229	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	243	first strand
Strand 2	A	246	253	anti-parallel
Strand 3	A	270	276	anti-parallel
Strand 4	A	281	286	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	300	first strand
Strand 2	A	311	320	anti-parallel
Strand 3	A	306	308	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	300	first strand
Strand 2	A	311	320	anti-parallel
Strand 3	A	369	376	anti-parallel
Strand 4	A	387	389	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	407	first strand
Strand 2	A	410	415	anti-parallel
Strand 3	A	424	432	anti-parallel
Strand 4	A	435	438	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	407	first strand
Strand 2	A	410	415	anti-parallel
Strand 3	A	424	432	anti-parallel
Strand 4	A	442	444	anti-parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	142	first strand
Strand 2	B	474	478	parallel
Strand 3	B	484	492	anti-parallel
Strand 4	B	501	507	anti-parallel
Strand 5	B	511	516	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	152	first strand
Strand 2	B	566	567	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	180	first strand
Strand 2	B	185	192	anti-parallel
Strand 3	B	202	209	anti-parallel
Strand 4	B	223	229	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	213	first strand
Strand 2	B	219	220	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	243	first strand
Strand 2	B	246	253	anti-parallel
Strand 3	B	270	275	anti-parallel
Strand 4	B	281	284	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	300	first strand
Strand 2	B	311	318	anti-parallel
Strand 3	B	307	308	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	300	first strand
Strand 2	B	311	318	anti-parallel
Strand 3	B	370	377	anti-parallel
Strand 4	B	387	389	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	407	first strand
Strand 2	B	410	415	anti-parallel
Strand 3	B	424	432	anti-parallel
Strand 4	B	435	438	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	407	first strand
Strand 2	B	410	415	anti-parallel
Strand 3	B	424	432	anti-parallel
Strand 4	B	442	444	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	534	first strand
Strand 2	B	539	548	anti-parallel
Strand 3	B	557	564	anti-parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	474	478	parallel
Strand 3	C	484	492	anti-parallel
Strand 4	C	501	506	anti-parallel
Strand 5	C	515	516	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	152	first strand
Strand 2	C	566	567	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	180	first strand
Strand 2	C	185	192	anti-parallel
Strand 3	C	202	213	anti-parallel
Strand 4	C	219	229	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	243	first strand
Strand 2	C	246	253	anti-parallel
Strand 3	C	269	275	anti-parallel
Strand 4	C	281	284	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	295	300	first strand
Strand 2	C	311	320	anti-parallel
Strand 3	C	307	308	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	295	300	first strand
Strand 2	C	311	320	anti-parallel
Strand 3	C	369	376	anti-parallel
Strand 4	C	386	389	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	407	first strand
Strand 2	C	410	415	anti-parallel
Strand 3	C	424	432	anti-parallel
Strand 4	C	435	438	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	407	first strand
Strand 2	C	410	415	anti-parallel
Strand 3	C	424	432	anti-parallel
Strand 4	C	442	444	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	471	472	first strand
Strand 2	C	524	534	parallel
Strand 3	C	539	549	anti-parallel
Strand 4	C	556	564	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	142	first strand
Strand 2	D	474	478	parallel
Strand 3	D	484	492	anti-parallel
Strand 4	D	501	506	anti-parallel
Strand 5	D	515	516	anti-parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	557	567	anti-parallel
Strand 3	D	539	548	anti-parallel
Strand 4	D	524	534	anti-parallel
Strand 5	D	471	472	parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	172	180	first strand
Strand 2	D	185	192	anti-parallel
Strand 3	D	202	213	anti-parallel
Strand 4	D	219	229	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	243	first strand
Strand 2	D	246	253	anti-parallel
Strand 3	D	269	275	anti-parallel
Strand 4	D	281	285	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	300	first strand
Strand 2	D	311	320	anti-parallel
Strand 3	D	306	308	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	300	first strand
Strand 2	D	311	320	anti-parallel
Strand 3	D	368	377	anti-parallel
Strand 4	D	384	389	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	407	first strand
Strand 2	D	410	415	anti-parallel
Strand 3	D	424	432	anti-parallel
Strand 4	D	435	438	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	407	first strand
Strand 2	D	410	415	anti-parallel
Strand 3	D	424	432	anti-parallel
Strand 4	D	442	444	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4FZH

Analysis of interatomic Contacts of Structural Units in PDB entry:
4FZH