Analysis of interatomic Contacts of Structural Units in PDB entry:
4FZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FZI entry

There are 2 chains in PDB entry 4FZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 5GLU 281
B
 TYR 5GLY 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4FZI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 43Right-handed alpha
Helix 2
2
A
50 54Right-handed 310
Helix 3
3
A
55 67Right-handed alpha
Helix 4
4
A
69 73Right-handed 310
Helix 5
5
A
80 84Right-handed 310
Helix 6
6
A
85 101Right-handed alpha
Helix 7
7
A
117 131Right-handed alpha
Helix 8
8
A
143 153Right-handed alpha
Helix 9
9
A
171 181Right-handed alpha
Helix 10
10
A
202 213Right-handed alpha
Helix 11
11
A
215 227Right-handed alpha
Helix 12
12
A
237 246Right-handed alpha
Helix 13
13
A
253 262Right-handed alpha
Helix 14
14
A
272 276Right-handed 310
Helix 15
15
B
29 43Right-handed alpha
Helix 16
16
B
50 54Right-handed 310
Helix 17
17
B
55 67Right-handed alpha
Helix 18
18
B
69 73Right-handed 310
Helix 19
19
B
80 84Right-handed 310
Helix 20
20
B
85 101Right-handed alpha
Helix 21
21
B
117 131Right-handed alpha
Helix 22
22
B
143 152Right-handed alpha
Helix 23
23
B
171 181Right-handed alpha
Helix 24
24
B
202 212Right-handed alpha
Helix 25
25
B
215 227Right-handed alpha
Helix 26
26
B
237 246Right-handed alpha
Helix 27
27
B
253 262Right-handed alpha
Helix 28
28
B
272 276Right-handed 310
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There are 4 sheets in PDB entry 4FZI. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
15 17anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
46 48parallel
Strand 3
A
74 79parallel
Strand 4
A
105 110parallel
Strand 5
A
134 140parallel
Strand 6
A
160 164parallel
Strand 7
A
184 188parallel
Strand 8
A
230 231parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 9first strand
Strand 2
B
15 17anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
46 48parallel
Strand 3
B
74 79parallel
Strand 4
B
105 110parallel
Strand 5
B
134 140parallel
Strand 6
B
160 164parallel
Strand 7
B
184 188parallel
Strand 8
B
230 231parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il