Analysis of interatomic Contacts of Structural Units in PDB entry:
4G0J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4G0J entry

There are 10 chains in PDB entry 4G0J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	GLN 291
B	ALA 2	GLN 291
C	ALA 2	GLN 291
D	ALA 2	GLN 291
E	ALA 2	GLN 291
F	ALA 2	GLN 291
G	ALA 2	GLN 291
H	ALA 2	GLN 291
I	ALA 2	GLN 291
J	ALA 2	GLN 291

There are135 helices in PDB entry 4G0J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	3	6	Right-handed 310
Helix 2	2	A	23	31	Right-handed alpha
Helix 3	3	A	36	40	Right-handed 310
Helix 4	4	A	54	61	Right-handed 310
Helix 5	5	A	74	91	Right-handed alpha
Helix 6	6	A	94	104	Right-handed alpha
Helix 7	7	A	107	120	Right-handed alpha
Helix 8	8	A	123	128	Right-handed alpha
Helix 9	9	A	128	140	Right-handed alpha
Helix 10	10	A	148	152	Right-handed 310
Helix 11	11	A	198	212	Right-handed alpha
Helix 12	12	A	233	247	Right-handed alpha
Helix 13	13	A	266	277	Right-handed alpha
Helix 14	14	A	281	291	Right-handed alpha
Helix 15	15	B	3	6	Right-handed 310
Helix 16	16	B	23	31	Right-handed alpha
Helix 17	17	B	36	40	Right-handed 310
Helix 18	18	B	54	61	Right-handed 310
Helix 19	19	B	74	91	Right-handed alpha
Helix 20	20	B	94	104	Right-handed alpha
Helix 21	21	B	107	120	Right-handed alpha
Helix 22	22	B	123	128	Right-handed alpha
Helix 23	23	B	128	140	Right-handed alpha
Helix 24	24	B	170	174	Right-handed 310
Helix 25	25	B	198	212	Right-handed alpha
Helix 26	26	B	233	247	Right-handed alpha
Helix 27	27	B	266	277	Right-handed alpha
Helix 28	28	B	281	291	Right-handed alpha
Helix 29	29	C	3	6	Right-handed 310
Helix 30	30	C	23	31	Right-handed alpha
Helix 31	31	C	36	40	Right-handed 310
Helix 32	32	C	54	61	Right-handed 310
Helix 33	33	C	74	89	Right-handed alpha
Helix 34	34	C	94	104	Right-handed alpha
Helix 35	35	C	107	120	Right-handed alpha
Helix 36	36	C	123	128	Right-handed alpha
Helix 37	37	C	128	140	Right-handed alpha
Helix 38	38	C	198	212	Right-handed alpha
Helix 39	39	C	233	245	Right-handed alpha
Helix 40	40	C	266	277	Right-handed alpha
Helix 41	41	C	281	291	Right-handed alpha
Helix 42	42	D	3	6	Right-handed 310
Helix 43	43	D	23	31	Right-handed alpha
Helix 44	44	D	36	40	Right-handed 310
Helix 45	45	D	54	61	Right-handed 310
Helix 46	46	D	74	90	Right-handed alpha
Helix 47	47	D	94	103	Right-handed alpha
Helix 48	48	D	107	119	Right-handed alpha
Helix 49	49	D	123	128	Right-handed alpha
Helix 50	50	D	128	141	Right-handed alpha
Helix 51	51	D	170	174	Right-handed 310
Helix 52	52	D	198	212	Right-handed alpha
Helix 53	53	D	233	247	Right-handed alpha
Helix 54	54	D	266	279	Right-handed alpha
Helix 55	55	D	281	291	Right-handed alpha
Helix 56	56	E	3	6	Right-handed 310
Helix 57	57	E	23	31	Right-handed alpha
Helix 58	58	E	54	61	Right-handed 310
Helix 59	59	E	74	90	Right-handed alpha
Helix 60	60	E	94	104	Right-handed alpha
Helix 61	61	E	107	119	Right-handed alpha
Helix 62	62	E	123	127	Right-handed 310
Helix 63	63	E	128	141	Right-handed alpha
Helix 64	64	E	170	174	Right-handed 310
Helix 65	65	E	199	213	Right-handed alpha
Helix 66	66	E	233	247	Right-handed alpha
Helix 67	67	E	266	279	Right-handed alpha
Helix 68	68	E	281	291	Right-handed alpha
Helix 69	69	F	3	6	Right-handed 310
Helix 70	70	F	23	31	Right-handed alpha
Helix 71	71	F	36	40	Right-handed 310
Helix 72	72	F	54	61	Right-handed 310
Helix 73	73	F	74	89	Right-handed alpha
Helix 74	74	F	94	104	Right-handed alpha
Helix 75	75	F	107	119	Right-handed alpha
Helix 76	76	F	123	127	Right-handed 310
Helix 77	77	F	128	141	Right-handed alpha
Helix 78	78	F	198	212	Right-handed alpha
Helix 79	79	F	233	247	Right-handed alpha
Helix 80	80	F	266	278	Right-handed alpha
Helix 81	81	F	281	291	Right-handed alpha
Helix 82	82	G	3	6	Right-handed 310
Helix 83	83	G	23	31	Right-handed alpha
Helix 84	84	G	36	40	Right-handed 310
Helix 85	85	G	54	61	Right-handed 310
Helix 86	86	G	74	90	Right-handed alpha
Helix 87	87	G	97	103	Right-handed alpha
Helix 88	88	G	107	120	Right-handed alpha
Helix 89	89	G	123	128	Right-handed alpha
Helix 90	90	G	128	140	Right-handed alpha
Helix 91	91	G	170	174	Right-handed 310
Helix 92	92	G	198	212	Right-handed alpha
Helix 93	93	G	233	247	Right-handed alpha
Helix 94	94	G	266	278	Right-handed alpha
Helix 95	95	G	281	291	Right-handed alpha
Helix 96	96	H	3	6	Right-handed 310
Helix 97	97	H	23	31	Right-handed alpha
Helix 98	98	H	36	40	Right-handed 310
Helix 99	99	H	54	61	Right-handed 310
Helix 100	100	H	74	89	Right-handed alpha
Helix 101	101	H	94	104	Right-handed alpha
Helix 102	102	H	107	119	Right-handed alpha
Helix 103	103	H	123	128	Right-handed alpha
Helix 104	104	H	128	140	Right-handed alpha
Helix 105	105	H	198	212	Right-handed alpha
Helix 106	106	H	233	247	Right-handed alpha
Helix 107	107	H	266	278	Right-handed alpha
Helix 108	108	H	281	291	Right-handed alpha
Helix 109	109	I	3	6	Right-handed 310
Helix 110	110	I	23	31	Right-handed alpha
Helix 111	111	I	36	40	Right-handed 310
Helix 112	112	I	54	61	Right-handed 310
Helix 113	113	I	74	89	Right-handed alpha
Helix 114	114	I	94	104	Right-handed alpha
Helix 115	115	I	107	120	Right-handed alpha
Helix 116	116	I	123	127	Right-handed 310
Helix 117	117	I	128	141	Right-handed alpha
Helix 118	118	I	170	174	Right-handed 310
Helix 119	119	I	199	212	Right-handed alpha
Helix 120	120	I	233	247	Right-handed alpha
Helix 121	121	I	266	279	Right-handed alpha
Helix 122	122	I	281	291	Right-handed alpha
Helix 123	123	J	3	6	Right-handed 310
Helix 124	124	J	23	31	Right-handed alpha
Helix 125	125	J	36	40	Right-handed 310
Helix 126	126	J	54	61	Right-handed 310
Helix 127	127	J	74	90	Right-handed alpha
Helix 128	128	J	94	104	Right-handed alpha
Helix 129	129	J	107	120	Right-handed alpha
Helix 130	130	J	123	127	Right-handed 310
Helix 131	131	J	128	141	Right-handed alpha
Helix 132	132	J	198	212	Right-handed alpha
Helix 133	133	J	233	247	Right-handed alpha
Helix 134	134	J	266	279	Right-handed alpha
Helix 135	135	J	281	291	Right-handed alpha

There are 35 sheets in PDB entry 4G0J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	9	first strand
Strand 2	A	20	21	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	13	first strand
Strand 2	A	16	17	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	45	first strand
Strand 2	A	51	52	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	160	first strand
Strand 2	A	164	168	anti-parallel
Strand 3	A	186	191	anti-parallel
Strand 4	A	225	229	anti-parallel
Strand 5	A	219	220	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	9	first strand
Strand 2	B	20	21	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	13	first strand
Strand 2	B	16	17	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	51	52	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	160	first strand
Strand 2	B	164	168	anti-parallel
Strand 3	B	187	191	anti-parallel
Strand 4	B	225	227	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	9	first strand
Strand 2	C	20	21	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	13	first strand
Strand 2	C	16	17	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	160	first strand
Strand 2	C	164	169	anti-parallel
Strand 3	C	186	191	anti-parallel
Strand 4	C	225	230	anti-parallel
Strand 5	C	216	220	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	8	13	first strand
Strand 2	D	16	21	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	46	first strand
Strand 2	D	50	52	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	92	first strand
Strand 2	E	197	198	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	160	first strand
Strand 2	D	164	169	anti-parallel
Strand 3	D	186	191	anti-parallel
Strand 4	D	225	230	anti-parallel
Strand 5	D	216	219	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	8	11	first strand
Strand 2	E	18	21	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	51	52	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	156	160	first strand
Strand 2	E	164	168	anti-parallel
Strand 3	E	186	191	anti-parallel
Strand 4	E	225	230	anti-parallel
Strand 5	E	216	220	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	8	13	first strand
Strand 2	F	16	21	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	46	first strand
Strand 2	F	50	51	anti-parallel

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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	156	160	first strand
Strand 2	F	164	169	anti-parallel
Strand 3	F	186	191	anti-parallel
Strand 4	F	225	230	anti-parallel
Strand 5	F	216	220	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	8	9	first strand
Strand 2	G	20	21	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	13	first strand
Strand 2	G	16	17	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	46	first strand
Strand 2	G	50	52	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	156	160	first strand
Strand 2	G	164	168	anti-parallel
Strand 3	G	186	191	anti-parallel
Strand 4	G	225	230	anti-parallel
Strand 5	G	216	219	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	8	13	first strand
Strand 2	H	16	21	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	45	first strand
Strand 2	H	51	52	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	91	92	first strand
Strand 2	I	197	198	anti-parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	160	first strand
Strand 2	H	164	169	anti-parallel
Strand 3	H	186	191	anti-parallel
Strand 4	H	225	230	anti-parallel
Strand 5	H	216	220	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	8	11	first strand
Strand 2	I	18	21	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	44	45	first strand
Strand 2	I	51	52	anti-parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	156	160	first strand
Strand 2	I	164	168	anti-parallel
Strand 3	I	186	191	anti-parallel
Strand 4	I	225	230	anti-parallel
Strand 5	I	216	220	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	8	13	first strand
Strand 2	J	16	21	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	44	46	first strand
Strand 2	J	50	52	anti-parallel

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There are 5 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	156	160	first strand
Strand 2	J	164	169	anti-parallel
Strand 3	J	186	191	anti-parallel
Strand 4	J	225	230	anti-parallel
Strand 5	J	216	220	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4G0J

Analysis of interatomic Contacts of Structural Units in PDB entry:
4G0J