Analysis of interatomic Contacts of Structural Units in PDB entry:
4G0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G0O entry

There are 2 chains in PDB entry 4G0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 561LEU 699
B
 ASP 562LEU 699
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4G0O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
586 603Right-handed alpha
Helix 2
2
A
618 620Right-handed 310
Helix 3
3
A
621 633Right-handed alpha
Helix 4
4
A
649 659Right-handed alpha
Helix 5
5
A
669 676Right-handed alpha
Helix 6
6
A
677 692Right-handed alpha
Helix 7
7
B
586 602Right-handed alpha
Helix 8
8
B
618 620Right-handed 310
Helix 9
9
B
621 633Right-handed alpha
Helix 10
10
B
649 659Right-handed alpha
Helix 11
11
B
669 674Right-handed alpha
Helix 12
12
B
677 692Right-handed alpha
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There are 6 sheets in PDB entry 4G0O. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 567first strand
Strand 2
A
695 698anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
605 606parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
615 616first strand
Strand 2
A
574 578parallel
Strand 3
A
638 642parallel
Strand 4
A
665 668parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
563 567first strand
Strand 2
B
695 698anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
570 571first strand
Strand 2
B
605 606parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
615 616first strand
Strand 2
B
574 578parallel
Strand 3
B
638 642parallel
Strand 4
B
665 668parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il