Analysis of interatomic Contacts of Structural Units in PDB entry:
4G0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G0R entry

There are 2 chains in PDB entry 4G0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 38TYR 593
C
 C 1 A 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4G0R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
100 104Right-handed 310
Helix 2
2
A
121 126Right-handed alpha
Helix 3
3
A
127 137Right-handed alpha
Helix 4
4
A
194 199Right-handed 310
Helix 5
5
A
246 250Right-handed 310
Helix 6
6
A
254 259Right-handed alpha
Helix 7
7
A
290 294Right-handed 310
Helix 8
8
A
374 378Right-handed 310
Helix 9
9
A
385 389Right-handed 310
Helix 10
10
A
414 418Right-handed 310
Helix 11
11
A
430 432Right-handed 310
Helix 12
12
A
440 444Right-handed 310
Helix 13
13
A
448 452Right-handed 310
Helix 14
14
A
566 571Right-handed 310
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There are 11 sheets in PDB entry 4G0R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 56first strand
Strand 2
A
59 73anti-parallel
Strand 3
A
527 543anti-parallel
Strand 4
A
138 160anti-parallel
Strand 5
A
275 276anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
138 160anti-parallel
Strand 3
A
170 174anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 174first strand
Strand 2
A
138 160anti-parallel
Strand 3
A
282 283anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 85first strand
Strand 2
A
107 116anti-parallel
Strand 3
A
213 219anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 85first strand
Strand 2
A
107 116anti-parallel
Strand 3
A
503 507anti-parallel
Strand 4
A
180 184anti-parallel
Strand 5
A
262 264anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 225first strand
Strand 2
A
240 242anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
460 461parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 354first strand
Strand 2
A
357 360anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 384first strand
Strand 2
A
400 404anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 421first strand
Strand 2
A
434 435anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 476first strand
Strand 2
A
493 494parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il