Analysis of interatomic Contacts of Structural Units in PDB entry:
4G0V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G0V entry

There are 6 chains in PDB entry 4G0V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 452ASP 1201
B
 SER 449ASP 1201
C
 A 1 C 8
D
 T 9 T 20
E
 A 1 C 8
F
 T 9 T 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 63 helices in PDB entry 4G0V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
467 470Right-handed 310
Helix 2
2
A
478 490Right-handed alpha
Helix 3
3
A
491 495Right-handed 310
Helix 4
4
A
508 512Right-handed 310
Helix 5
5
A
513 520Right-handed alpha
Helix 6
6
A
520 531Right-handed alpha
Helix 7
7
A
542 546Right-handed 310
Helix 8
8
A
559 577Right-handed alpha
Helix 9
9
A
577 583Right-handed alpha
Helix 10
10
A
658 670Right-handed alpha
Helix 11
11
A
673 694Right-handed alpha
Helix 12
12
A
711 718Right-handed alpha
Helix 13
13
A
718 731Right-handed alpha
Helix 14
14
A
739 753Right-handed alpha
Helix 15
15
A
760 772Right-handed alpha
Helix 16
16
A
776 789Right-handed alpha
Helix 17
17
A
829 834Right-handed alpha
Helix 18
18
A
835 842Right-handed 310
Helix 19
19
A
862 867Right-handed alpha
Helix 20
20
A
884 897Right-handed alpha
Helix 21
21
A
947 955Right-handed alpha
Helix 22
22
A
955 962Right-handed alpha
Helix 23
23
A
989 1000Right-handed alpha
Helix 24
24
A
1000 1005Right-handed alpha
Helix 25
25
A
1030 1076Right-handed alpha
Helix 26
26
A
1085 1096Right-handed alpha
Helix 27
27
A
1101 1110Right-handed alpha
Helix 28
28
A
1138 1143Right-handed alpha
Helix 29
29
A
1145 1149Right-handed 310
Helix 30
30
A
1150 1173Right-handed alpha
Helix 31
31
A
1175 1201Right-handed alpha
Helix 32
32
B
467 470Right-handed 310
Helix 33
33
B
478 490Right-handed alpha
Helix 34
34
B
492 495Right-handed 310
Helix 35
35
B
513 520Right-handed alpha
Helix 36
36
B
520 531Right-handed alpha
Helix 37
37
B
542 547Right-handed 310
Helix 38
38
B
559 577Right-handed alpha
Helix 39
39
B
577 583Right-handed alpha
Helix 40
40
B
639 644Right-handed alpha
Helix 41
41
B
646 649Right-handed 310
Helix 42
42
B
658 670Right-handed alpha
Helix 43
43
B
673 692Right-handed alpha
Helix 44
44
B
711 718Right-handed alpha
Helix 45
45
B
718 731Right-handed alpha
Helix 46
46
B
739 753Right-handed alpha
Helix 47
47
B
760 772Right-handed alpha
Helix 48
48
B
776 789Right-handed alpha
Helix 49
49
B
829 834Right-handed alpha
Helix 50
50
B
835 842Right-handed 310
Helix 51
51
B
862 867Right-handed alpha
Helix 52
52
B
884 897Right-handed alpha
Helix 53
53
B
947 955Right-handed alpha
Helix 54
54
B
955 961Right-handed alpha
Helix 55
55
B
989 1000Right-handed alpha
Helix 56
56
B
1000 1005Right-handed alpha
Helix 57
57
B
1030 1075Right-handed alpha
Helix 58
58
B
1085 1096Right-handed alpha
Helix 59
59
B
1101 1110Right-handed alpha
Helix 60
60
B
1138 1143Right-handed alpha
Helix 61
61
B
1145 1149Right-handed 310
Helix 62
62
B
1150 1174Right-handed alpha
Helix 63
63
B
1175 1201Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 4G0V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
497 502first strand
Strand 2
A
472 477parallel
Strand 3
A
551 555parallel
Strand 4
A
586 589parallel
Strand 5
A
651 655anti-parallel
Strand 6
A
708 710parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 759first strand
Strand 2
A
823 824anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
844 846first strand
Strand 2
A
851 854anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
869 872first strand
Strand 2
A
877 880anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
914 919first strand
Strand 2
A
922 926anti-parallel
Strand 3
A
1008 1012anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
928 933first strand
Strand 2
A
936 941anti-parallel
Strand 3
A
984 987anti-parallel
Strand 4
A
972 975anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1016 1019first strand
Strand 2
A
1025 1028anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
497 502first strand
Strand 2
B
472 477parallel
Strand 3
B
551 555parallel
Strand 4
B
586 589parallel
Strand 5
B
651 655anti-parallel
Strand 6
B
708 710parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
758 759first strand
Strand 2
B
823 824anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
844 847first strand
Strand 2
B
850 854anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
870 872first strand
Strand 2
B
877 879anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
914 919first strand
Strand 2
B
922 926anti-parallel
Strand 3
B
1008 1012anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
928 933first strand
Strand 2
B
936 941anti-parallel
Strand 3
B
984 987anti-parallel
Strand 4
B
972 975anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1016 1019first strand
Strand 2
B
1025 1028anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il