Analysis of interatomic Contacts of Structural Units in PDB entry:
4G1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G1V entry

There is 1 chain in PDB entry 4G1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2VAL 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4G1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
13 36Right-handed alpha
Helix 3
3
A
37 42Right-handed 310
Helix 4
4
A
44 50Right-handed alpha
Helix 5
5
A
52 67Right-handed alpha
Helix 6
6
A
70 73Right-handed 310
Helix 7
7
A
74 88Right-handed alpha
Helix 8
8
A
91 93Right-handed 310
Helix 9
9
A
94 111Right-handed alpha
Helix 10
10
A
112 114Right-handed 310
Helix 11
11
A
115 144Right-handed alpha
Helix 12
12
A
178 182Right-handed 310
Helix 13
13
A
236 245Right-handed alpha
Helix 14
14
A
283 298Right-handed alpha
Helix 15
15
A
317 326Right-handed alpha
Helix 16
16
A
345 353Right-handed alpha
Helix 17
17
A
364 378Right-handed alpha
Helix 18
18
A
381 383Right-handed 310
Helix 19
19
A
392 397Right-handed 310
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There are 2 sheets in PDB entry 4G1V. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 210first strand
Strand 2
A
189 194anti-parallel
Strand 3
A
251 258anti-parallel
Strand 4
A
150 161anti-parallel
Strand 5
A
164 171anti-parallel
Strand 6
A
220 225anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 337first strand
Strand 2
A
303 309parallel
Strand 3
A
275 280parallel
Strand 4
A
358 363parallel
Strand 5
A
385 389parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il