Analysis of interatomic Contacts of Structural Units in PDB entry:
4G38


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G38 entry

There is 1 chain in PDB entry 4G38 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 81ASP 570
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4G38. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
86 88Right-handed 310
Helix 2
2
A
93 107Right-handed alpha
Helix 3
3
A
133 139Right-handed alpha
Helix 4
4
A
163 165Right-handed 310
Helix 5
5
A
166 181Right-handed alpha
Helix 6
6
A
229 233Right-handed 310
Helix 7
7
A
281 297Right-handed alpha
Helix 8
8
A
306 315Right-handed alpha
Helix 9
9
A
315 328Right-handed alpha
Helix 10
10
A
362 364Right-handed 310
Helix 11
11
A
375 386Right-handed alpha
Helix 12
12
A
407 418Right-handed alpha
Helix 13
13
A
425 430Right-handed alpha
Helix 14
14
A
450 465Right-handed alpha
Helix 15
15
A
485 489Right-handed 310
Helix 16
16
A
524 542Right-handed alpha
Helix 17
17
A
547 555Right-handed alpha
Helix 18
18
A
563 568Right-handed alpha
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There are 6 sheets in PDB entry 4G38. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
143 144anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 92first strand
Strand 2
A
389 392anti-parallel
Strand 3
A
398 404anti-parallel
Strand 4
A
355 360anti-parallel
Strand 5
A
347 350anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
112 114anti-parallel
Strand 3
A
366 367anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 157first strand
Strand 2
A
218 221parallel
Strand 3
A
235 241parallel
Strand 4
A
246 253anti-parallel
Strand 5
A
272 278anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 370first strand
Strand 2
A
373 374anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 433first strand
Strand 2
A
474 477parallel
Strand 3
A
491 497parallel
Strand 4
A
500 505anti-parallel
Strand 5
A
516 523anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il