Analysis of interatomic Contacts of Structural Units in PDB entry:
4G3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G3F entry

There is 1 chain in PDB entry 4G3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 344GLY 676
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4G3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
351 360Right-handed alpha
Helix 2
2
A
440 445Right-handed alpha
Helix 3
3
A
478 487Right-handed alpha
Helix 4
4
A
490 510Right-handed alpha
Helix 5
5
A
519 521Right-handed 310
Helix 6
6
A
561 565Right-handed 310
Helix 7
7
A
566 571Right-handed alpha
Helix 8
8
A
577 594Right-handed alpha
Helix 9
9
A
606 613Right-handed alpha
Helix 10
10
A
615 620Right-handed 310
Helix 11
11
A
625 636Right-handed alpha
Helix 12
12
A
639 643Right-handed 310
Helix 13
13
A
645 660Right-handed alpha
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There are 3 sheets in PDB entry 4G3F. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 349first strand
Strand 2
A
379 383parallel
Strand 3
A
457 463anti-parallel
Strand 4
A
466 471anti-parallel
Strand 5
A
427 434anti-parallel
Strand 6
A
414 421anti-parallel
Strand 7
A
401 411anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 514first strand
Strand 2
A
541 542anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
523 525first strand
Strand 2
A
532 534anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il