Analysis of interatomic Contacts of Structural Units in PDB entry:
4G3M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G3M entry

There are 4 chains in PDB entry 4G3M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LYS 360
B
 GLY -1THR 359
C
 GLY -1THR 359
D
 GLY -1THR 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 4G3M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 15Right-handed alpha
Helix 2
2
A
49 59Right-handed alpha
Helix 3
3
A
60 63Right-handed 310
Helix 4
4
A
82 91Right-handed alpha
Helix 5
5
A
108 116Right-handed alpha
Helix 6
6
A
126 134Right-handed alpha
Helix 7
7
A
134 144Right-handed alpha
Helix 8
8
A
172 180Right-handed alpha
Helix 9
9
A
180 186Right-handed alpha
Helix 10
10
A
193 200Right-handed alpha
Helix 11
11
A
229 234Right-handed alpha
Helix 12
12
A
248 258Right-handed alpha
Helix 13
13
A
271 282Right-handed alpha
Helix 14
14
A
292 302Right-handed alpha
Helix 15
15
B
1 15Right-handed alpha
Helix 16
16
B
49 59Right-handed alpha
Helix 17
17
B
60 63Right-handed 310
Helix 18
18
B
82 90Right-handed alpha
Helix 19
19
B
108 116Right-handed alpha
Helix 20
20
B
126 133Right-handed alpha
Helix 21
21
B
134 144Right-handed alpha
Helix 22
22
B
172 180Right-handed alpha
Helix 23
23
B
181 186Right-handed alpha
Helix 24
24
B
193 200Right-handed alpha
Helix 25
25
B
229 234Right-handed alpha
Helix 26
26
B
248 257Right-handed alpha
Helix 27
27
B
271 283Right-handed alpha
Helix 28
28
B
292 302Right-handed alpha
Helix 29
29
B
333 337Right-handed 310
Helix 30
30
C
0 15Right-handed alpha
Helix 31
31
C
49 59Right-handed alpha
Helix 32
32
C
60 63Right-handed 310
Helix 33
33
C
82 90Right-handed alpha
Helix 34
34
C
108 116Right-handed alpha
Helix 35
35
C
126 134Right-handed alpha
Helix 36
36
C
134 144Right-handed alpha
Helix 37
37
C
172 181Right-handed alpha
Helix 38
38
C
181 186Right-handed alpha
Helix 39
39
C
193 197Right-handed alpha
Helix 40
40
C
229 234Right-handed alpha
Helix 41
41
C
248 257Right-handed alpha
Helix 42
42
C
271 282Right-handed alpha
Helix 43
43
C
292 303Right-handed alpha
Helix 44
44
D
0 15Right-handed alpha
Helix 45
45
D
49 59Right-handed alpha
Helix 46
46
D
60 63Right-handed 310
Helix 47
47
D
82 91Right-handed alpha
Helix 48
48
D
108 117Right-handed alpha
Helix 49
49
D
126 134Right-handed alpha
Helix 50
50
D
134 144Right-handed alpha
Helix 51
51
D
172 180Right-handed alpha
Helix 52
52
D
181 186Right-handed alpha
Helix 53
53
D
193 200Right-handed alpha
Helix 54
54
D
229 233Right-handed 310
Helix 55
55
D
271 282Right-handed alpha
Helix 56
56
D
292 303Right-handed alpha
Helix 57
57
D
333 337Right-handed 310
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There are 8 sheets in PDB entry 4G3M. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 41first strand
Strand 2
A
27 32anti-parallel
Strand 3
A
66 71anti-parallel
Strand 4
A
94 99parallel
Strand 5
A
120 123parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 264first strand
Strand 2
A
239 243parallel
Strand 3
A
215 219parallel
Strand 4
A
188 192parallel
Strand 5
A
286 289parallel
Strand 6
A
147 155parallel
Strand 7
A
307 313parallel
Strand 8
A
351 358anti-parallel
Strand 9
A
340 348anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 41first strand
Strand 2
B
27 32anti-parallel
Strand 3
B
66 69anti-parallel
Strand 4
B
94 97parallel
Strand 5
B
120 123parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 265first strand
Strand 2
B
239 244parallel
Strand 3
B
215 219parallel
Strand 4
B
188 192parallel
Strand 5
B
286 291parallel
Strand 6
B
147 155parallel
Strand 7
B
307 313parallel
Strand 8
B
351 358anti-parallel
Strand 9
B
340 348anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 41first strand
Strand 2
C
27 32anti-parallel
Strand 3
C
66 69anti-parallel
Strand 4
C
94 97parallel
Strand 5
C
120 123parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
261 264first strand
Strand 2
C
239 243parallel
Strand 3
C
215 219parallel
Strand 4
C
188 192parallel
Strand 5
C
286 289parallel
Strand 6
C
147 155parallel
Strand 7
C
307 313parallel
Strand 8
C
351 358anti-parallel
Strand 9
C
340 348anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 41first strand
Strand 2
D
27 32anti-parallel
Strand 3
D
66 71anti-parallel
Strand 4
D
94 99parallel
Strand 5
D
120 123parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
261 265first strand
Strand 2
D
239 244parallel
Strand 3
D
215 219parallel
Strand 4
D
188 192parallel
Strand 5
D
286 289parallel
Strand 6
D
147 155parallel
Strand 7
D
307 313parallel
Strand 8
D
351 358anti-parallel
Strand 9
D
340 348anti-parallel
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