Analysis of interatomic Contacts of Structural Units in PDB entry:
4G43


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G43 entry

There are 6 chains in PDB entry 4G43 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1LEU 272
B
 ASP 1GLU 97
C
 ILE 1GLU 8
D
 GLU 1LEU 272
E
 ASP 1GLU 97
F
 ILE 1GLU 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4G43. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
47 53Right-handed alpha
Helix 2
2
A
55 84Right-handed alpha
Helix 3
3
A
134 136Right-handed 310
Helix 4
4
A
137 147Right-handed alpha
Helix 5
5
A
148 159Right-handed alpha
Helix 6
6
A
159 177Right-handed alpha
Helix 7
7
A
249 251Right-handed 310
Helix 8
8
D
47 53Right-handed alpha
Helix 9
9
D
55 84Right-handed alpha
Helix 10
10
D
134 136Right-handed 310
Helix 11
11
D
137 146Right-handed alpha
Helix 12
12
D
148 159Right-handed alpha
Helix 13
13
D
159 172Right-handed alpha
Helix 14
14
D
172 177Right-handed alpha
Helix 15
15
D
249 251Right-handed 310
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There are 13 sheets in PDB entry 4G43. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
31 37anti-parallel
Strand 3
A
22 28anti-parallel
Strand 4
A
3 12anti-parallel
Strand 5
A
92 101anti-parallel
Strand 6
A
107 115anti-parallel
Strand 7
A
118 123anti-parallel
Strand 8
A
130 132anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 190first strand
Strand 2
A
195 204anti-parallel
Strand 3
A
237 245anti-parallel
Strand 4
A
224 231anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
210 215anti-parallel
Strand 3
A
253 258anti-parallel
Strand 4
A
266 269anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 10first strand
Strand 2
B
20 29anti-parallel
Strand 3
B
61 69anti-parallel
Strand 4
B
49 50anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 10first strand
Strand 2
B
20 29anti-parallel
Strand 3
B
61 69anti-parallel
Strand 4
B
54 55anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
35 40anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
90 93anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 45first strand
Strand 2
D
31 37anti-parallel
Strand 3
D
22 28anti-parallel
Strand 4
D
3 12anti-parallel
Strand 5
D
92 101anti-parallel
Strand 6
D
107 115anti-parallel
Strand 7
D
118 124anti-parallel
Strand 8
D
129 132anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
183 191first strand
Strand 2
D
194 204anti-parallel
Strand 3
D
237 245anti-parallel
Strand 4
D
225 226anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
183 191first strand
Strand 2
D
194 204anti-parallel
Strand 3
D
237 245anti-parallel
Strand 4
D
230 231anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
218 219first strand
Strand 2
D
209 215anti-parallel
Strand 3
D
253 259anti-parallel
Strand 4
D
266 268anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 10first strand
Strand 2
E
20 29anti-parallel
Strand 3
E
61 69anti-parallel
Strand 4
E
49 50anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 10first strand
Strand 2
E
20 29anti-parallel
Strand 3
E
61 69anti-parallel
Strand 4
E
54 55anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
43 44first strand
Strand 2
E
35 40anti-parallel
Strand 3
E
77 82anti-parallel
Strand 4
E
90 93anti-parallel
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