Analysis of interatomic Contacts of Structural Units in PDB entry:
4G6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G6B entry

There are 2 chains in PDB entry 4G6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ARG 426
B
 ALA 1ARG 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4G6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 80Right-handed alpha
Helix 2
2
A
81 92Right-handed alpha
Helix 3
3
A
96 109Right-handed alpha
Helix 4
4
A
117 122Right-handed alpha
Helix 5
5
A
129 139Right-handed alpha
Helix 6
6
A
140 145Right-handed alpha
Helix 7
7
A
146 149Right-handed 310
Helix 8
8
A
153 181Right-handed alpha
Helix 9
9
A
192 203Right-handed alpha
Helix 10
10
A
212 225Right-handed alpha
Helix 11
11
A
232 244Right-handed alpha
Helix 12
12
A
247 265Right-handed alpha
Helix 13
13
A
272 276Right-handed 310
Helix 14
14
A
314 327Right-handed alpha
Helix 15
15
A
337 349Right-handed alpha
Helix 16
16
A
349 355Right-handed alpha
Helix 17
17
A
360 372Right-handed alpha
Helix 18
18
A
375 377Right-handed 310
Helix 19
19
A
378 401Right-handed alpha
Helix 20
20
B
34 38Right-handed 310
Helix 21
21
B
73 80Right-handed alpha
Helix 22
22
B
81 92Right-handed alpha
Helix 23
23
B
96 110Right-handed alpha
Helix 24
24
B
114 123Right-handed alpha
Helix 25
25
B
129 139Right-handed alpha
Helix 26
26
B
140 144Right-handed 310
Helix 27
27
B
153 181Right-handed alpha
Helix 28
28
B
192 203Right-handed alpha
Helix 29
29
B
212 225Right-handed alpha
Helix 30
30
B
232 244Right-handed alpha
Helix 31
31
B
247 266Right-handed alpha
Helix 32
32
B
272 276Right-handed 310
Helix 33
33
B
314 327Right-handed alpha
Helix 34
34
B
337 349Right-handed alpha
Helix 35
35
B
349 356Right-handed alpha
Helix 36
36
B
360 373Right-handed alpha
Helix 37
37
B
375 377Right-handed 310
Helix 38
38
B
378 401Right-handed alpha
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There are 3 sheets in PDB entry 4G6B. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 412first strand
Strand 2
B
49 54parallel
Strand 3
A
41 42parallel
Strand 4
B
28 30parallel
Strand 5
B
14 20anti-parallel
Strand 6
B
6 10anti-parallel
Strand 7
A
6 10anti-parallel
Strand 8
A
14 20anti-parallel
Strand 9
A
28 30anti-parallel
Strand 10
B
40 42parallel
Strand 11
A
49 54parallel
Strand 12
B
409 412parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
65 68anti-parallel
Strand 3
A
71 72anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
65 68anti-parallel
Strand 3
B
71 72anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il