Analysis of interatomic Contacts of Structural Units in PDB entry:
4G6Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G6Z entry

There are 2 chains in PDB entry 4G6Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3PRO 99
A
 TYR 101ALA 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4G6Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 35Right-handed alpha
Helix 2
2
A
47 51Right-handed 310
Helix 3
3
A
52 66Right-handed alpha
Helix 4
4
A
80 94Right-handed alpha
Helix 5
5
A
171 173Right-handed 310
Helix 6
6
A
186 198Right-handed alpha
Helix 7
7
A
208 211Right-handed 310
Helix 8
8
A
212 223Right-handed alpha
Helix 9
9
A
252 259Right-handed alpha
Helix 10
10
A
262 272Right-handed alpha
Helix 11
11
A
284 292Right-handed alpha
Helix 12
12
A
293 297Right-handed 310
Helix 13
13
A
305 320Right-handed alpha
Helix 14
14
A
321 335Right-handed alpha
Helix 15
15
A
339 346Right-handed alpha
Helix 16
16
A
348 357Right-handed alpha
Helix 17
17
A
362 371Right-handed alpha
Helix 18
18
A
372 374Right-handed 310
Helix 19
19
A
447 455Right-handed alpha
Helix 20
20
A
456 466Right-handed alpha
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There are 5 sheets in PDB entry 4G6Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
38 43parallel
Strand 3
A
72 76parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
145 148anti-parallel
Strand 3
A
177 179anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 160first strand
Strand 2
A
164 169anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
229 233parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
302 303parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il