Analysis of interatomic Contacts of Structural Units in PDB entry:
4G7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G7N entry

There are 2 chains in PDB entry 4G7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 379PRO 596
B
 SER 379ILE 597
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4G7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
467 469Right-handed 310
Helix 2
2
A
478 480Right-handed 310
Helix 3
3
A
481 497Right-handed alpha
Helix 4
4
A
553 579Right-handed alpha
Helix 5
5
B
478 480Right-handed 310
Helix 6
6
B
481 497Right-handed alpha
Helix 7
7
B
554 578Right-handed alpha
Helix 8
8
B
579 581Right-handed 310
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There are 6 sheets in PDB entry 4G7N. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 400first strand
Strand 2
A
404 408anti-parallel
Strand 3
A
414 421anti-parallel
Strand 4
A
428 436anti-parallel
Strand 5
A
454 455anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 400first strand
Strand 2
A
404 408anti-parallel
Strand 3
A
414 421anti-parallel
Strand 4
A
428 436anti-parallel
Strand 5
A
442 446anti-parallel
Strand 6
A
471 473anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 541first strand
Strand 2
A
529 533anti-parallel
Strand 3
A
520 524anti-parallel
Strand 4
A
509 514anti-parallel
Strand 5
A
500 505anti-parallel
Strand 6
A
590 592parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 400first strand
Strand 2
B
404 408anti-parallel
Strand 3
B
414 421anti-parallel
Strand 4
B
428 436anti-parallel
Strand 5
B
454 455anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 400first strand
Strand 2
B
404 408anti-parallel
Strand 3
B
414 421anti-parallel
Strand 4
B
428 436anti-parallel
Strand 5
B
442 446anti-parallel
Strand 6
B
471 473anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
537 541first strand
Strand 2
B
529 533anti-parallel
Strand 3
B
520 524anti-parallel
Strand 4
B
509 514anti-parallel
Strand 5
B
500 505anti-parallel
Strand 6
B
590 592parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il