Analysis of interatomic Contacts of Structural Units in PDB entry:
4G8T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G8T entry

There are 3 chains in PDB entry 4G8T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ARG 442
B
 SER 2ARG 442
C
 SER 2VAL 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 4G8T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
54 65Right-handed alpha
Helix 2
2
A
66 68Right-handed 310
Helix 3
3
A
72 74Right-handed 310
Helix 4
4
A
75 87Right-handed alpha
Helix 5
5
A
104 125Right-handed alpha
Helix 6
6
A
128 132Right-handed 310
Helix 7
7
A
152 156Right-handed 310
Helix 8
8
A
168 174Right-handed alpha
Helix 9
9
A
180 196Right-handed alpha
Helix 10
10
A
208 223Right-handed alpha
Helix 11
11
A
237 248Right-handed alpha
Helix 12
12
A
266 279Right-handed alpha
Helix 13
13
A
290 301Right-handed alpha
Helix 14
14
A
309 314Right-handed alpha
Helix 15
15
A
314 329Right-handed alpha
Helix 16
16
A
340 352Right-handed alpha
Helix 17
17
A
364 369Right-handed alpha
Helix 18
18
A
399 413Right-handed alpha
Helix 19
19
A
420 425Right-handed alpha
Helix 20
20
B
54 69Right-handed alpha
Helix 21
21
B
72 74Right-handed 310
Helix 22
22
B
75 87Right-handed alpha
Helix 23
23
B
104 125Right-handed alpha
Helix 24
24
B
128 132Right-handed 310
Helix 25
25
B
152 156Right-handed 310
Helix 26
26
B
168 174Right-handed alpha
Helix 27
27
B
180 196Right-handed alpha
Helix 28
28
B
208 223Right-handed alpha
Helix 29
29
B
237 248Right-handed alpha
Helix 30
30
B
266 279Right-handed alpha
Helix 31
31
B
290 301Right-handed alpha
Helix 32
32
B
309 314Right-handed alpha
Helix 33
33
B
314 329Right-handed alpha
Helix 34
34
B
340 352Right-handed alpha
Helix 35
35
B
364 369Right-handed alpha
Helix 36
36
B
399 413Right-handed alpha
Helix 37
37
B
420 425Right-handed alpha
Helix 38
38
C
54 69Right-handed alpha
Helix 39
39
C
72 74Right-handed 310
Helix 40
40
C
75 87Right-handed alpha
Helix 41
41
C
88 91Right-handed 310
Helix 42
42
C
104 125Right-handed alpha
Helix 43
43
C
128 132Right-handed 310
Helix 44
44
C
152 156Right-handed 310
Helix 45
45
C
168 174Right-handed alpha
Helix 46
46
C
180 196Right-handed alpha
Helix 47
47
C
208 223Right-handed alpha
Helix 48
48
C
237 248Right-handed alpha
Helix 49
49
C
266 279Right-handed alpha
Helix 50
50
C
290 301Right-handed alpha
Helix 51
51
C
309 314Right-handed alpha
Helix 52
52
C
314 329Right-handed alpha
Helix 53
53
C
340 352Right-handed alpha
Helix 54
54
C
364 369Right-handed alpha
Helix 55
55
C
399 413Right-handed alpha
Helix 56
56
C
420 425Right-handed alpha
Helix 57
57
D
54 65Right-handed alpha
Helix 58
58
D
66 68Right-handed 310
Helix 59
59
D
72 74Right-handed 310
Helix 60
60
D
75 87Right-handed alpha
Helix 61
61
D
104 125Right-handed alpha
Helix 62
62
D
128 132Right-handed 310
Helix 63
63
D
152 156Right-handed 310
Helix 64
64
D
168 174Right-handed alpha
Helix 65
65
D
180 196Right-handed alpha
Helix 66
66
D
208 223Right-handed alpha
Helix 67
67
D
237 248Right-handed alpha
Helix 68
68
D
266 279Right-handed alpha
Helix 69
69
D
290 301Right-handed alpha
Helix 70
70
D
309 314Right-handed alpha
Helix 71
71
D
314 329Right-handed alpha
Helix 72
72
D
340 353Right-handed alpha
Helix 73
73
D
364 369Right-handed alpha
Helix 74
74
D
399 413Right-handed alpha
Helix 75
75
D
420 425Right-handed alpha
Back to top of page

There are 19 sheets in PDB entry 4G8T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 17first strand
Strand 2
A
31 41anti-parallel
Strand 3
A
46 52anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
26 27anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
385 387anti-parallel
Strand 3
A
381 382anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
200 203parallel
Strand 3
A
228 231parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 256first strand
Strand 2
A
282 284parallel
Strand 3
A
305 306parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 17first strand
Strand 2
B
31 41anti-parallel
Strand 3
B
46 52anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
26 27anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 142first strand
Strand 2
B
385 387anti-parallel
Strand 3
B
381 382anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
200 203parallel
Strand 3
B
228 231parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 256first strand
Strand 2
B
282 284parallel
Strand 3
B
305 306parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 17first strand
Strand 2
C
31 41anti-parallel
Strand 3
C
46 52anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 23first strand
Strand 2
C
26 27anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
140 142first strand
Strand 2
C
385 387anti-parallel
Strand 3
C
381 382anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 147first strand
Strand 2
C
200 203parallel
Strand 3
C
228 231parallel
Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
255 256first strand
Strand 2
C
282 284parallel
Strand 3
C
305 306parallel
Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 17first strand
Strand 2
D
31 41anti-parallel
Strand 3
D
46 52anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 23first strand
Strand 2
D
26 27anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
140 142first strand
Strand 2
D
385 387anti-parallel
Strand 3
D
381 382anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 147first strand
Strand 2
D
200 203parallel
Strand 3
D
228 231parallel
Strand 4
D
254 256parallel
Strand 5
D
282 284parallel
Strand 6
D
305 306parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il