Analysis of interatomic Contacts of Structural Units in PDB entry:
4G9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G9H entry

There are 2 chains in PDB entry 4G9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 0ILE 201
B
 VAL 0ILE 201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4G9H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 23Right-handed alpha
Helix 2
2
A
43 48Right-handed alpha
Helix 3
3
A
66 78Right-handed alpha
Helix 4
4
A
79 82Right-handed 310
Helix 5
5
A
89 106Right-handed alpha
Helix 6
6
A
106 115Right-handed alpha
Helix 7
7
A
119 142Right-handed alpha
Helix 8
8
A
153 169Right-handed alpha
Helix 9
9
A
176 188Right-handed alpha
Helix 10
10
A
189 199Right-handed alpha
Helix 11
11
B
12 23Right-handed alpha
Helix 12
12
B
43 47Right-handed 310
Helix 13
13
B
66 78Right-handed alpha
Helix 14
14
B
79 82Right-handed 310
Helix 15
15
B
89 106Right-handed alpha
Helix 16
16
B
107 115Right-handed 310
Helix 17
17
B
119 142Right-handed alpha
Helix 18
18
B
153 169Right-handed alpha
Helix 19
19
B
176 188Right-handed alpha
Helix 20
20
B
189 199Right-handed alpha
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There are 2 sheets in PDB entry 4G9H. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
26 32anti-parallel
Strand 3
A
2 6parallel
Strand 4
A
55 57anti-parallel
Strand 5
A
63 65anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 38first strand
Strand 2
B
26 32anti-parallel
Strand 3
B
2 6parallel
Strand 4
B
55 57anti-parallel
Strand 5
B
63 65anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il