Analysis of interatomic Contacts of Structural Units in PDB entry:
4G9I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4G9I entry

There are 6 chains in PDB entry 4G9I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MSE 1	LEU 772
B	MSE 1	LEU 772
C	HIS 5	LEU 772
D	MSE 1	LEU 772
E	MSE 1	LEU 772
F	MSE 1	LEU 772

There are185 helices in PDB entry 4G9I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	17	28	Right-handed alpha
Helix 2	2	A	52	63	Right-handed alpha
Helix 3	3	A	109	117	Right-handed alpha
Helix 4	4	A	137	141	Right-handed 310
Helix 5	5	A	147	156	Right-handed 310
Helix 6	6	A	159	168	Right-handed alpha
Helix 7	7	A	201	211	Right-handed alpha
Helix 8	8	A	232	243	Right-handed alpha
Helix 9	9	A	256	264	Right-handed alpha
Helix 10	10	A	267	275	Right-handed alpha
Helix 11	11	A	311	319	Right-handed alpha
Helix 12	12	A	340	349	Right-handed alpha
Helix 13	13	A	430	446	Right-handed alpha
Helix 14	14	A	464	475	Right-handed alpha
Helix 15	15	A	486	491	Right-handed alpha
Helix 16	16	A	491	498	Right-handed alpha
Helix 17	17	A	545	552	Right-handed alpha
Helix 18	18	A	553	562	Right-handed alpha
Helix 19	19	A	566	575	Right-handed alpha
Helix 20	20	A	579	583	Right-handed 310
Helix 21	21	A	589	595	Right-handed alpha
Helix 22	22	A	595	601	Right-handed alpha
Helix 23	23	A	611	621	Right-handed alpha
Helix 24	24	A	633	644	Right-handed alpha
Helix 25	25	A	661	674	Right-handed alpha
Helix 26	26	A	677	703	Right-handed alpha
Helix 27	27	A	718	729	Right-handed alpha
Helix 28	28	A	730	732	Right-handed 310
Helix 29	29	A	745	747	Right-handed 310
Helix 30	30	A	748	763	Right-handed alpha
Helix 31	31	B	17	28	Right-handed alpha
Helix 32	32	B	49	58	Right-handed alpha
Helix 33	33	B	58	63	Right-handed alpha
Helix 34	34	B	109	117	Right-handed alpha
Helix 35	35	B	137	141	Right-handed 310
Helix 36	36	B	147	151	Right-handed 310
Helix 37	37	B	159	168	Right-handed alpha
Helix 38	38	B	201	211	Right-handed alpha
Helix 39	39	B	232	242	Right-handed alpha
Helix 40	40	B	256	262	Right-handed alpha
Helix 41	41	B	267	275	Right-handed alpha
Helix 42	42	B	310	319	Right-handed alpha
Helix 43	43	B	340	349	Right-handed alpha
Helix 44	44	B	430	446	Right-handed alpha
Helix 45	45	B	464	476	Right-handed alpha
Helix 46	46	B	485	498	Right-handed alpha
Helix 47	47	B	514	518	Right-handed 310
Helix 48	48	B	547	552	Right-handed alpha
Helix 49	49	B	553	562	Right-handed alpha
Helix 50	50	B	568	575	Right-handed alpha
Helix 51	51	B	579	583	Right-handed 310
Helix 52	52	B	589	594	Right-handed alpha
Helix 53	53	B	595	601	Right-handed alpha
Helix 54	54	B	610	621	Right-handed alpha
Helix 55	55	B	633	644	Right-handed alpha
Helix 56	56	B	661	671	Right-handed alpha
Helix 57	57	B	677	704	Right-handed alpha
Helix 58	58	B	713	717	Right-handed 310
Helix 59	59	B	718	729	Right-handed alpha
Helix 60	60	B	745	747	Right-handed 310
Helix 61	61	B	748	763	Right-handed alpha
Helix 62	62	C	17	28	Right-handed alpha
Helix 63	63	C	49	63	Right-handed alpha
Helix 64	64	C	109	117	Right-handed alpha
Helix 65	65	C	137	141	Right-handed 310
Helix 66	66	C	147	156	Right-handed 310
Helix 67	67	C	159	168	Right-handed alpha
Helix 68	68	C	200	211	Right-handed alpha
Helix 69	69	C	232	243	Right-handed alpha
Helix 70	70	C	256	263	Right-handed alpha
Helix 71	71	C	269	276	Right-handed alpha
Helix 72	72	C	310	319	Right-handed alpha
Helix 73	73	C	342	347	Right-handed alpha
Helix 74	74	C	430	446	Right-handed alpha
Helix 75	75	C	465	476	Right-handed alpha
Helix 76	76	C	477	479	Right-handed 310
Helix 77	77	C	485	496	Right-handed alpha
Helix 78	78	C	515	517	Right-handed 310
Helix 79	79	C	545	552	Right-handed alpha
Helix 80	80	C	552	562	Right-handed alpha
Helix 81	81	C	566	574	Right-handed alpha
Helix 82	82	C	575	577	Right-handed 310
Helix 83	83	C	579	583	Right-handed 310
Helix 84	84	C	589	595	Right-handed alpha
Helix 85	85	C	595	601	Right-handed alpha
Helix 86	86	C	610	619	Right-handed alpha
Helix 87	87	C	633	644	Right-handed alpha
Helix 88	88	C	661	671	Right-handed alpha
Helix 89	89	C	677	705	Right-handed alpha
Helix 90	90	C	713	717	Right-handed 310
Helix 91	91	C	718	729	Right-handed alpha
Helix 92	92	C	730	732	Right-handed 310
Helix 93	93	C	745	748	Right-handed 310
Helix 94	94	C	749	763	Right-handed alpha
Helix 95	95	D	17	28	Right-handed alpha
Helix 96	96	D	54	61	Right-handed alpha
Helix 97	97	D	109	118	Right-handed alpha
Helix 98	98	D	137	141	Right-handed 310
Helix 99	99	D	147	155	Right-handed 310
Helix 100	100	D	159	168	Right-handed alpha
Helix 101	101	D	201	211	Right-handed alpha
Helix 102	102	D	232	243	Right-handed alpha
Helix 103	103	D	256	264	Right-handed alpha
Helix 104	104	D	267	275	Right-handed alpha
Helix 105	105	D	293	297	Right-handed 310
Helix 106	106	D	310	319	Right-handed alpha
Helix 107	107	D	430	445	Right-handed alpha
Helix 108	108	D	446	448	Right-handed 310
Helix 109	109	D	466	475	Right-handed alpha
Helix 110	110	D	486	499	Right-handed alpha
Helix 111	111	D	547	552	Right-handed alpha
Helix 112	112	D	552	562	Right-handed alpha
Helix 113	113	D	566	575	Right-handed alpha
Helix 114	114	D	589	595	Right-handed alpha
Helix 115	115	D	595	601	Right-handed alpha
Helix 116	116	D	610	621	Right-handed alpha
Helix 117	117	D	633	643	Right-handed alpha
Helix 118	118	D	662	672	Right-handed alpha
Helix 119	119	D	677	704	Right-handed alpha
Helix 120	120	D	713	717	Right-handed 310
Helix 121	121	D	718	729	Right-handed alpha
Helix 122	122	D	730	732	Right-handed 310
Helix 123	123	D	745	747	Right-handed 310
Helix 124	124	D	748	761	Right-handed alpha
Helix 125	125	E	10	15	Right-handed 310
Helix 126	126	E	16	28	Right-handed alpha
Helix 127	127	E	49	54	Right-handed alpha
Helix 128	128	E	57	62	Right-handed alpha
Helix 129	129	E	109	117	Right-handed alpha
Helix 130	130	E	137	141	Right-handed 310
Helix 131	131	E	147	155	Right-handed 310
Helix 132	132	E	159	168	Right-handed alpha
Helix 133	133	E	200	211	Right-handed alpha
Helix 134	134	E	232	243	Right-handed alpha
Helix 135	135	E	256	263	Right-handed alpha
Helix 136	136	E	267	275	Right-handed alpha
Helix 137	137	E	310	319	Right-handed alpha
Helix 138	138	E	340	349	Right-handed alpha
Helix 139	139	E	430	445	Right-handed alpha
Helix 140	140	E	446	448	Right-handed 310
Helix 141	141	E	464	475	Right-handed alpha
Helix 142	142	E	486	498	Right-handed alpha
Helix 143	143	E	545	552	Right-handed alpha
Helix 144	144	E	552	562	Right-handed alpha
Helix 145	145	E	566	574	Right-handed alpha
Helix 146	146	E	575	577	Right-handed 310
Helix 147	147	E	589	595	Right-handed alpha
Helix 148	148	E	595	601	Right-handed alpha
Helix 149	149	E	610	620	Right-handed alpha
Helix 150	150	E	633	643	Right-handed alpha
Helix 151	151	E	661	672	Right-handed alpha
Helix 152	152	E	677	705	Right-handed alpha
Helix 153	153	E	713	717	Right-handed 310
Helix 154	154	E	718	723	Right-handed alpha
Helix 155	155	E	723	729	Right-handed alpha
Helix 156	156	E	730	732	Right-handed 310
Helix 157	157	E	748	761	Right-handed alpha
Helix 158	158	F	16	24	Right-handed alpha
Helix 159	159	F	54	60	Right-handed alpha
Helix 160	160	F	109	117	Right-handed alpha
Helix 161	161	F	147	156	Right-handed 310
Helix 162	162	F	159	167	Right-handed alpha
Helix 163	163	F	203	211	Right-handed alpha
Helix 164	164	F	232	243	Right-handed alpha
Helix 165	165	F	256	264	Right-handed alpha
Helix 166	166	F	269	275	Right-handed alpha
Helix 167	167	F	310	319	Right-handed alpha
Helix 168	168	F	342	347	Right-handed alpha
Helix 169	169	F	430	446	Right-handed alpha
Helix 170	170	F	464	475	Right-handed alpha
Helix 171	171	F	486	498	Right-handed alpha
Helix 172	172	F	547	552	Right-handed alpha
Helix 173	173	F	553	563	Right-handed alpha
Helix 174	174	F	568	575	Right-handed alpha
Helix 175	175	F	579	585	Right-handed 310
Helix 176	176	F	595	601	Right-handed alpha
Helix 177	177	F	610	621	Right-handed alpha
Helix 178	178	F	633	643	Right-handed alpha
Helix 179	179	F	661	672	Right-handed alpha
Helix 180	180	F	677	705	Right-handed alpha
Helix 181	181	F	713	717	Right-handed 310
Helix 182	182	F	723	728	Right-handed alpha
Helix 183	183	F	729	732	Right-handed 310
Helix 184	184	F	745	747	Right-handed 310
Helix 185	185	F	748	761	Right-handed alpha

There are 41 sheets in PDB entry 4G9I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	42	45	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	191	first strand
Strand 2	A	355	358	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	218	first strand
Strand 2	A	225	227	anti-parallel
Strand 3	A	328	329	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	253	first strand
Strand 2	A	302	306	parallel
Strand 3	A	281	285	anti-parallel
Strand 4	A	370	371	parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	392	393	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	412	415	anti-parallel
Strand 4	A	400	402	anti-parallel
Strand 5	A	456	459	parallel
Strand 6	A	483	484	parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	533	534	first strand
Strand 2	A	523	526	anti-parallel
Strand 3	A	504	507	anti-parallel
Strand 4	A	711	712	parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	512	514	first strand
Strand 2	A	518	521	anti-parallel
Strand 3	A	606	610	parallel
Strand 4	A	541	543	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	191	first strand
Strand 2	B	354	358	anti-parallel
Strand 3	B	216	218	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	226	first strand
Strand 2	B	328	329	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	251	253	first strand
Strand 2	B	302	306	parallel
Strand 3	B	282	286	anti-parallel
Strand 4	B	264	265	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	392	393	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	412	415	anti-parallel
Strand 4	B	400	402	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	533	534	first strand
Strand 2	B	523	526	anti-parallel
Strand 3	B	504	507	anti-parallel
Strand 4	B	711	712	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	543	first strand
Strand 2	B	606	608	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	34	first strand
Strand 2	C	88	89	parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	191	first strand
Strand 2	C	355	357	anti-parallel
Strand 3	C	216	218	parallel
Strand 4	C	225	227	anti-parallel
Strand 5	C	328	329	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	251	253	first strand
Strand 2	C	302	306	parallel
Strand 3	C	281	286	anti-parallel
Strand 4	C	264	265	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	251	253	first strand
Strand 2	C	302	306	parallel
Strand 3	C	281	286	anti-parallel
Strand 4	C	370	373	parallel
Strand 5	C	378	380	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	392	393	first strand
Strand 2	C	418	421	anti-parallel
Strand 3	C	412	414	anti-parallel
Strand 4	C	400	402	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	458	459	first strand
Strand 2	C	483	484	parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	503	513	first strand
Strand 2	C	519	527	anti-parallel
Strand 3	C	533	534	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	541	543	first strand
Strand 2	C	606	608	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	655	656	first strand
Strand 2	C	659	660	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	8	first strand
Strand 2	D	42	46	anti-parallel
Strand 3	D	32	36	anti-parallel
Strand 4	D	87	88	parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	191	first strand
Strand 2	D	354	358	anti-parallel
Strand 3	D	216	218	parallel
Strand 4	D	225	227	anti-parallel
Strand 5	D	328	329	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	325	326	first strand
Strand 2	D	251	253	anti-parallel
Strand 3	D	304	306	parallel
Strand 4	D	281	283	anti-parallel
Strand 5	D	370	372	parallel

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There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	392	393	first strand
Strand 2	D	418	421	anti-parallel
Strand 3	D	412	415	anti-parallel
Strand 4	D	400	402	anti-parallel
Strand 5	D	456	459	parallel
Strand 6	D	483	484	parallel

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There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	659	660	first strand
Strand 2	D	534	538	parallel
Strand 3	D	523	525	anti-parallel
Strand 4	D	504	507	anti-parallel
Strand 5	D	709	712	parallel
Strand 6	D	736	737	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	541	543	first strand
Strand 2	D	606	608	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	8	first strand
Strand 2	E	42	45	anti-parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	188	191	first strand
Strand 2	E	354	358	anti-parallel
Strand 3	E	216	218	parallel
Strand 4	E	225	227	anti-parallel
Strand 5	E	328	329	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	251	253	first strand
Strand 2	E	302	306	parallel
Strand 3	E	282	285	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	392	393	first strand
Strand 2	E	418	419	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	401	402	first strand
Strand 2	E	456	459	parallel
Strand 3	E	483	484	parallel

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There are 6 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	655	656	first strand
Strand 2	E	659	660	anti-parallel
Strand 3	E	533	538	parallel
Strand 4	E	523	526	anti-parallel
Strand 5	E	504	507	anti-parallel
Strand 6	E	709	712	parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	512	514	first strand
Strand 2	E	518	520	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	541	543	first strand
Strand 2	E	606	608	anti-parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	188	191	first strand
Strand 2	F	354	358	anti-parallel
Strand 3	F	216	218	parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	251	253	first strand
Strand 2	F	302	306	parallel
Strand 3	F	281	285	anti-parallel
Strand 4	F	370	371	parallel

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There are 6 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	392	393	first strand
Strand 2	F	418	421	anti-parallel
Strand 3	F	412	414	anti-parallel
Strand 4	F	400	402	anti-parallel
Strand 5	F	456	459	parallel
Strand 6	F	483	484	parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	504	512	first strand
Strand 2	F	519	526	anti-parallel
Strand 3	F	606	609	parallel
Strand 4	F	541	543	anti-parallel

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There are 5 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	504	512	first strand
Strand 2	F	519	526	anti-parallel
Strand 3	F	533	538	anti-parallel
Strand 4	F	659	660	parallel
Strand 5	F	655	656	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4G9I

Analysis of interatomic Contacts of Structural Units in PDB entry:
4G9I