Analysis of interatomic Contacts of Structural Units in PDB entry:
4GA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GA6 entry

There are 2 chains in PDB entry 4GA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 493
B
 MET 1GLU 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4GA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 28Right-handed alpha
Helix 2
2
A
64 67Right-handed 310
Helix 3
3
A
86 96Right-handed alpha
Helix 4
4
A
101 114Right-handed alpha
Helix 5
5
A
118 133Right-handed alpha
Helix 6
6
A
135 149Right-handed alpha
Helix 7
7
A
173 185Right-handed alpha
Helix 8
8
A
202 208Right-handed alpha
Helix 9
9
A
216 228Right-handed alpha
Helix 10
10
A
240 254Right-handed alpha
Helix 11
11
A
257 273Right-handed alpha
Helix 12
12
A
291 309Right-handed alpha
Helix 13
13
A
329 344Right-handed alpha
Helix 14
14
A
347 365Right-handed alpha
Helix 15
15
A
372 383Right-handed alpha
Helix 16
16
A
384 397Right-handed alpha
Helix 17
17
A
404 408Right-handed 310
Helix 18
18
A
429 440Right-handed alpha
Helix 19
19
A
473 488Right-handed alpha
Helix 20
20
B
21 28Right-handed alpha
Helix 21
21
B
64 68Right-handed 310
Helix 22
22
B
86 96Right-handed alpha
Helix 23
23
B
101 114Right-handed alpha
Helix 24
24
B
118 133Right-handed alpha
Helix 25
25
B
135 149Right-handed alpha
Helix 26
26
B
173 185Right-handed alpha
Helix 27
27
B
202 211Right-handed alpha
Helix 28
28
B
216 228Right-handed alpha
Helix 29
29
B
235 237Right-handed 310
Helix 30
30
B
240 254Right-handed alpha
Helix 31
31
B
257 273Right-handed alpha
Helix 32
32
B
291 309Right-handed alpha
Helix 33
33
B
329 344Right-handed alpha
Helix 34
34
B
347 365Right-handed alpha
Helix 35
35
B
372 383Right-handed alpha
Helix 36
36
B
384 397Right-handed alpha
Helix 37
37
B
404 408Right-handed 310
Helix 38
38
B
429 440Right-handed alpha
Helix 39
39
B
473 488Right-handed alpha
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There are 10 sheets in PDB entry 4GA6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
A
43 51anti-parallel
Strand 3
A
34 38anti-parallel
Strand 4
A
76 81anti-parallel
Strand 5
A
2 8anti-parallel
Strand 6
A
58 62parallel
Strand 7
A
16 19anti-parallel
Strand 8
A
43 51parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
B
43 51anti-parallel
Strand 3
B
34 38anti-parallel
Strand 4
B
76 81anti-parallel
Strand 5
B
2 8anti-parallel
Strand 6
B
58 62parallel
Strand 7
B
16 20anti-parallel
Strand 8
B
43 51parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
276 283parallel
Strand 3
A
312 319parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 193first strand
Strand 2
A
229 233parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 328first strand
Strand 2
A
449 452anti-parallel
Strand 3
A
465 471anti-parallel
Strand 4
A
413 418anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 460first strand
Strand 2
A
423 428anti-parallel
Strand 3
A
490 493anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 165first strand
Strand 2
B
276 283parallel
Strand 3
B
312 319parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 193first strand
Strand 2
B
229 233parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 328first strand
Strand 2
B
449 452anti-parallel
Strand 3
B
465 471anti-parallel
Strand 4
B
413 418anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
459 460first strand
Strand 2
B
423 428anti-parallel
Strand 3
B
490 492anti-parallel
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