Analysis of interatomic Contacts of Structural Units in PDB entry:
4GEZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GEZ entry

There are 4 chains in PDB entry 4GEZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 77ASP 441
B
TYR 77ASP 441
C
TYR 77ASP 441
D
TYR 77LYS 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 4GEZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
133 135Right-handed 310
Helix 2
2
A
188 191Right-handed 310
Helix 3
3
A
237 241Right-handed 310
Helix 4
4
A
417 421Right-handed 310
Helix 5
5
B
133 135Right-handed 310
Helix 6
6
B
188 191Right-handed 310
Helix 7
7
B
417 421Right-handed 310
Helix 8
8
C
133 135Right-handed 310
Helix 9
9
C
188 191Right-handed 310
Helix 10
10
C
237 241Right-handed 310
Helix 11
11
C
417 421Right-handed 310
Helix 12
12
D
133 135Right-handed 310
Helix 13
13
D
188 191Right-handed 310
Helix 14
14
D
237 241Right-handed 310
Helix 15
15
D
417 421Right-handed 310
Helix 16
16
E
133 135Right-handed 310
Helix 17
17
E
188 191Right-handed 310
Helix 18
18
E
237 241Right-handed 310
Helix 19
19
E
417 421Right-handed 310
Helix 20
20
F
133 138Right-handed 310
Helix 21
21
F
188 191Right-handed 310
Helix 22
22
F
237 241Right-handed 310
Helix 23
23
F
417 421Right-handed 310
Helix 24
24
G
133 135Right-handed 310
Helix 25
25
G
188 191Right-handed 310
Helix 26
26
G
237 241Right-handed 310
Helix 27
27
G
417 421Right-handed 310
Helix 28
28
H
133 138Right-handed 310
Helix 29
29
H
188 191Right-handed 310
Helix 30
30
H
237 241Right-handed 310
Helix 31
31
H
417 421Right-handed 310
Helix 32
32
I
133 135Right-handed 310
Helix 33
33
I
237 241Right-handed 310
Helix 34
34
I
417 421Right-handed 310
Helix 35
35
J
133 135Right-handed 310
Helix 36
36
J
188 191Right-handed 310
Helix 37
37
J
417 421Right-handed 310
Helix 38
38
K
133 135Right-handed 310
Helix 39
39
K
188 191Right-handed 310
Helix 40
40
K
237 241Right-handed 310
Helix 41
41
K
417 421Right-handed 310
Helix 42
42
L
133 135Right-handed 310
Helix 43
43
L
188 191Right-handed 310
Helix 44
44
L
237 241Right-handed 310
Helix 45
45
L
417 421Right-handed 310
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There are 60 sheets in PDB entry 4GEZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
89 94first strand
Strand 2
A
423 431anti-parallel
Strand 3
A
407 413anti-parallel
Strand 4
A
377 393anti-parallel
Strand 5
A
358 365anti-parallel
Strand 6
A
346 350anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 117first strand
Strand 2
A
122 131anti-parallel
Strand 3
A
147 152anti-parallel
Strand 4
A
163 167anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
170 175first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
193 198anti-parallel
Strand 4
A
201 207anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
222 224first strand
Strand 2
A
227 234anti-parallel
Strand 3
A
242 249anti-parallel
Strand 4
A
252 258anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
267 274first strand
Strand 2
A
277 283anti-parallel
Strand 3
A
293 297anti-parallel
Strand 4
A
302 305anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
89 94first strand
Strand 2
B
423 431anti-parallel
Strand 3
B
407 413anti-parallel
Strand 4
B
377 393anti-parallel
Strand 5
B
358 365anti-parallel
Strand 6
B
346 350anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
108 117first strand
Strand 2
B
122 131anti-parallel
Strand 3
B
147 152anti-parallel
Strand 4
B
163 167anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
170 175first strand
Strand 2
B
180 186anti-parallel
Strand 3
B
193 198anti-parallel
Strand 4
B
201 207anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
222 224first strand
Strand 2
B
227 237anti-parallel
Strand 3
B
240 249anti-parallel
Strand 4
B
252 258anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
267 274first strand
Strand 2
B
277 283anti-parallel
Strand 3
B
293 296anti-parallel
Strand 4
B
302 305anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
89 94first strand
Strand 2
C
423 431anti-parallel
Strand 3
C
407 413anti-parallel
Strand 4
C
378 393anti-parallel
Strand 5
C
358 365anti-parallel
Strand 6
C
346 350anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
108 117first strand
Strand 2
C
122 131anti-parallel
Strand 3
C
147 152anti-parallel
Strand 4
C
163 167anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
170 175first strand
Strand 2
C
180 186anti-parallel
Strand 3
C
193 198anti-parallel
Strand 4
C
201 207anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
222 224first strand
Strand 2
C
227 234anti-parallel
Strand 3
C
242 249anti-parallel
Strand 4
C
252 258anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
267 274first strand
Strand 2
C
277 283anti-parallel
Strand 3
C
293 296anti-parallel
Strand 4
C
302 305anti-parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
89 94first strand
Strand 2
D
423 431anti-parallel
Strand 3
D
407 413anti-parallel
Strand 4
D
378 393anti-parallel
Strand 5
D
358 365anti-parallel
Strand 6
D
346 350anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
108 117first strand
Strand 2
D
122 131anti-parallel
Strand 3
D
147 152anti-parallel
Strand 4
D
163 167anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
170 175first strand
Strand 2
D
180 186anti-parallel
Strand 3
D
193 198anti-parallel
Strand 4
D
201 207anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
222 224first strand
Strand 2
D
227 234anti-parallel
Strand 3
D
242 249anti-parallel
Strand 4
D
252 259anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
267 274first strand
Strand 2
D
277 283anti-parallel
Strand 3
D
293 297anti-parallel
Strand 4
D
302 305anti-parallel
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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
89 94first strand
Strand 2
E
423 431anti-parallel
Strand 3
E
407 413anti-parallel
Strand 4
E
378 393anti-parallel
Strand 5
E
358 365anti-parallel
Strand 6
E
346 350anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
108 117first strand
Strand 2
E
122 131anti-parallel
Strand 3
E
147 152anti-parallel
Strand 4
E
163 167anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
170 175first strand
Strand 2
E
180 186anti-parallel
Strand 3
E
193 198anti-parallel
Strand 4
E
201 207anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
222 224first strand
Strand 2
E
227 234anti-parallel
Strand 3
E
242 249anti-parallel
Strand 4
E
252 258anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
267 274first strand
Strand 2
E
277 283anti-parallel
Strand 3
E
293 297anti-parallel
Strand 4
E
302 305anti-parallel
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There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
89 94first strand
Strand 2
F
423 431anti-parallel
Strand 3
F
407 413anti-parallel
Strand 4
F
378 393anti-parallel
Strand 5
F
358 365anti-parallel
Strand 6
F
346 350anti-parallel
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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
108 117first strand
Strand 2
F
122 131anti-parallel
Strand 3
F
147 152anti-parallel
Strand 4
F
163 167anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
170 175first strand
Strand 2
F
180 186anti-parallel
Strand 3
F
193 198anti-parallel
Strand 4
F
201 207anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
222 224first strand
Strand 2
F
227 234anti-parallel
Strand 3
F
242 249anti-parallel
Strand 4
F
252 258anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
267 274first strand
Strand 2
F
277 283anti-parallel
Strand 3
F
293 297anti-parallel
Strand 4
F
302 305anti-parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
89 94first strand
Strand 2
G
423 431anti-parallel
Strand 3
G
407 413anti-parallel
Strand 4
G
378 393anti-parallel
Strand 5
G
358 365anti-parallel
Strand 6
G
346 350anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
108 117first strand
Strand 2
G
122 131anti-parallel
Strand 3
G
147 152anti-parallel
Strand 4
G
163 167anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
170 175first strand
Strand 2
G
180 186anti-parallel
Strand 3
G
193 198anti-parallel
Strand 4
G
201 207anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
222 224first strand
Strand 2
G
227 234anti-parallel
Strand 3
G
242 249anti-parallel
Strand 4
G
252 258anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
267 274first strand
Strand 2
G
277 283anti-parallel
Strand 3
G
293 296anti-parallel
Strand 4
G
302 305anti-parallel
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There are 7 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
89 94first strand
Strand 2
H
423 431anti-parallel
Strand 3
H
407 413anti-parallel
Strand 4
H
377 393anti-parallel
Strand 5
H
358 365anti-parallel
Strand 6
H
346 350anti-parallel
Strand 7
H
340 341anti-parallel
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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
108 117first strand
Strand 2
H
122 131anti-parallel
Strand 3
H
147 152anti-parallel
Strand 4
H
163 167anti-parallel
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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
170 175first strand
Strand 2
H
180 186anti-parallel
Strand 3
H
193 198anti-parallel
Strand 4
H
201 207anti-parallel
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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
222 224first strand
Strand 2
H
227 234anti-parallel
Strand 3
H
242 249anti-parallel
Strand 4
H
252 258anti-parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
267 274first strand
Strand 2
H
277 283anti-parallel
Strand 3
H
293 297anti-parallel
Strand 4
H
302 305anti-parallel
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There are 6 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
89 94first strand
Strand 2
I
423 431anti-parallel
Strand 3
I
407 413anti-parallel
Strand 4
I
377 393anti-parallel
Strand 5
I
358 365anti-parallel
Strand 6
I
346 350anti-parallel
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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
108 117first strand
Strand 2
I
122 131anti-parallel
Strand 3
I
147 152anti-parallel
Strand 4
I
163 167anti-parallel
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There are 4 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
170 175first strand
Strand 2
I
180 186anti-parallel
Strand 3
I
193 198anti-parallel
Strand 4
I
201 207anti-parallel
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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
222 224first strand
Strand 2
I
227 234anti-parallel
Strand 3
I
242 249anti-parallel
Strand 4
I
252 258anti-parallel
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There are 4 strands in AS sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
267 274first strand
Strand 2
I
277 283anti-parallel
Strand 3
I
293 297anti-parallel
Strand 4
I
302 305anti-parallel
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There are 6 strands in AT sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
89 94first strand
Strand 2
J
423 431anti-parallel
Strand 3
J
407 413anti-parallel
Strand 4
J
378 393anti-parallel
Strand 5
J
358 365anti-parallel
Strand 6
J
346 350anti-parallel
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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
108 117first strand
Strand 2
J
122 131anti-parallel
Strand 3
J
147 152anti-parallel
Strand 4
J
163 167anti-parallel
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There are 5 strands in AV sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
201 207first strand
Strand 2
J
193 198anti-parallel
Strand 3
J
180 186anti-parallel
Strand 4
J
170 175anti-parallel
Strand 5
J
219 220parallel
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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
222 224first strand
Strand 2
J
227 237anti-parallel
Strand 3
J
240 249anti-parallel
Strand 4
J
252 258anti-parallel
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There are 4 strands in AX sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
267 274first strand
Strand 2
J
277 283anti-parallel
Strand 3
J
293 296anti-parallel
Strand 4
J
302 305anti-parallel
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There are 7 strands in AY sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
89 94first strand
Strand 2
K
423 431anti-parallel
Strand 3
K
407 413anti-parallel
Strand 4
K
378 393anti-parallel
Strand 5
K
358 365anti-parallel
Strand 6
K
346 350anti-parallel
Strand 7
K
341 342anti-parallel
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There are 4 strands in AZ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
108 117first strand
Strand 2
K
122 131anti-parallel
Strand 3
K
147 152anti-parallel
Strand 4
K
163 167anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
170 175first strand
Strand 2
K
180 186anti-parallel
Strand 3
K
193 198anti-parallel
Strand 4
K
201 207anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
222 224first strand
Strand 2
K
227 234anti-parallel
Strand 3
K
242 249anti-parallel
Strand 4
K
252 259anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
267 274first strand
Strand 2
K
277 283anti-parallel
Strand 3
K
293 296anti-parallel
Strand 4
K
302 305anti-parallel
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There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
89 94first strand
Strand 2
L
423 431anti-parallel
Strand 3
L
407 413anti-parallel
Strand 4
L
378 393anti-parallel
Strand 5
L
358 365anti-parallel
Strand 6
L
346 350anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
108 117first strand
Strand 2
L
122 131anti-parallel
Strand 3
L
147 152anti-parallel
Strand 4
L
163 167anti-parallel
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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
201 207first strand
Strand 2
L
193 198anti-parallel
Strand 3
L
180 186anti-parallel
Strand 4
L
170 175anti-parallel
Strand 5
L
219 220parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
222 224first strand
Strand 2
L
227 234anti-parallel
Strand 3
L
242 249anti-parallel
Strand 4
L
252 258anti-parallel
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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
267 274first strand
Strand 2
L
277 283anti-parallel
Strand 3
L
293 297anti-parallel
Strand 4
L
302 305anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il