Analysis of interatomic Contacts of Structural Units in PDB entry:
4GF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GF0 entry

There are 2 chains in PDB entry 4GF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0LEU 207
B
 LEU 3LEU 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4GF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 23Right-handed alpha
Helix 2
2
A
33 40Right-handed 310
Helix 3
3
A
41 46Right-handed alpha
Helix 4
4
A
66 78Right-handed alpha
Helix 5
5
A
79 82Right-handed 310
Helix 6
6
A
87 104Right-handed alpha
Helix 7
7
A
104 111Right-handed alpha
Helix 8
8
A
114 118Right-handed 310
Helix 9
9
A
121 147Right-handed alpha
Helix 10
10
A
160 170Right-handed alpha
Helix 11
11
A
178 181Right-handed 310
Helix 12
12
A
182 194Right-handed alpha
Helix 13
13
A
195 204Right-handed alpha
Helix 14
14
B
12 24Right-handed alpha
Helix 15
15
B
66 78Right-handed alpha
Helix 16
16
B
79 82Right-handed 310
Helix 17
17
B
87 104Right-handed alpha
Helix 18
18
B
104 111Right-handed alpha
Helix 19
19
B
114 118Right-handed 310
Helix 20
20
B
121 147Right-handed alpha
Helix 21
21
B
160 170Right-handed alpha
Helix 22
22
B
178 181Right-handed 310
Helix 23
23
B
182 194Right-handed alpha
Helix 24
24
B
195 204Right-handed alpha
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There are 2 sheets in PDB entry 4GF0. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
3 7parallel
Strand 3
A
55 57anti-parallel
Strand 4
A
63 65anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
4 7parallel
Strand 3
B
55 57anti-parallel
Strand 4
B
63 65anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il