Analysis of interatomic Contacts of Structural Units in PDB entry:
4GFJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GFJ entry

There is 1 chain in PDB entry 4GFJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3ALA 612
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 4GFJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 41Right-handed alpha
Helix 2
2
A
43 48Right-handed alpha
Helix 3
3
A
49 69Right-handed alpha
Helix 4
4
A
87 94Right-handed alpha
Helix 5
5
A
99 106Right-handed alpha
Helix 6
6
A
110 118Right-handed alpha
Helix 7
7
A
121 125Right-handed 310
Helix 8
8
A
139 149Right-handed alpha
Helix 9
9
A
163 167Right-handed 310
Helix 10
10
A
170 176Right-handed alpha
Helix 11
11
A
182 195Right-handed alpha
Helix 12
12
A
199 208Right-handed alpha
Helix 13
13
A
210 216Right-handed alpha
Helix 14
14
A
224 235Right-handed alpha
Helix 15
15
A
239 266Right-handed alpha
Helix 16
16
A
274 304Right-handed alpha
Helix 17
17
A
308 319Right-handed alpha
Helix 18
18
A
322 328Right-handed alpha
Helix 19
19
A
330 338Right-handed alpha
Helix 20
20
A
342 350Right-handed alpha
Helix 21
21
A
350 359Right-handed alpha
Helix 22
22
A
363 375Right-handed alpha
Helix 23
23
A
376 382Right-handed alpha
Helix 24
24
A
384 394Right-handed alpha
Helix 25
25
A
398 415Right-handed alpha
Helix 26
26
A
420 432Right-handed alpha
Helix 27
27
A
433 443Right-handed alpha
Helix 28
28
A
445 451Right-handed alpha
Helix 29
29
A
456 464Right-handed alpha
Helix 30
30
A
466 472Right-handed alpha
Helix 31
31
A
477 489Right-handed alpha
Helix 32
32
A
490 497Right-handed alpha
Helix 33
33
A
498 505Right-handed alpha
Helix 34
34
A
508 517Right-handed alpha
Helix 35
35
A
518 525Right-handed alpha
Helix 36
36
A
527 538Right-handed alpha
Helix 37
37
A
540 547Right-handed alpha
Helix 38
38
A
548 554Right-handed alpha
Helix 39
39
A
558 567Right-handed alpha
Helix 40
40
A
569 576Right-handed alpha
Helix 41
41
A
577 589Right-handed alpha
Helix 42
42
A
592 597Right-handed 310
Helix 43
43
A
598 602Right-handed 310
Helix 44
44
A
608 612Right-handed 310
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There is 1 sheet ( A) in PDB entry 4GFJ.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
77 82anti-parallel
Strand 3
A
85 86anti-parallel
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