Analysis of interatomic Contacts of Structural Units in PDB entry:
4GGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GGJ entry

There is 1 chain in PDB entry 4GGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 35THR 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4GGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 86Right-handed alpha
Helix 2
2
A
100 113Right-handed alpha
Helix 3
3
A
131 139Right-handed alpha
Helix 4
4
A
172 179Right-handed alpha
Helix 5
5
A
188 206Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4GGJ.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
181 186anti-parallel
Strand 3
A
163 167anti-parallel
Strand 4
A
155 159anti-parallel
Strand 5
A
90 95anti-parallel
Strand 6
A
116 121parallel
Strand 7
A
142 145parallel
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