Analysis of interatomic Contacts of Structural Units in PDB entry:
4GHN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GHN entry

There is 1 chain in PDB entry 4GHN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 32GLU 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4GHN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 48Right-handed 310
Helix 2
2
A
51 53Right-handed 310
Helix 3
3
A
54 70Right-handed alpha
Helix 4
4
A
79 92Right-handed alpha
Helix 5
5
A
96 110Right-handed alpha
Helix 6
6
A
142 148Right-handed alpha
Helix 7
7
A
164 172Right-handed alpha
Helix 8
8
A
173 175Right-handed 310
Helix 9
9
A
179 189Right-handed alpha
Helix 10
10
A
219 223Right-handed 310
Helix 11
11
A
251 264Right-handed alpha
Helix 12
12
A
280 289Right-handed alpha
Helix 13
13
A
327 339Right-handed alpha
Helix 14
14
A
398 404Right-handed alpha
Helix 15
15
A
407 419Right-handed alpha
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There are 6 sheets in PDB entry 4GHN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
367 371anti-parallel
Strand 3
A
357 361anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 124first strand
Strand 2
A
193 194anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
135 138anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
155 159anti-parallel
Strand 3
A
199 206anti-parallel
Strand 4
A
209 216anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 236first strand
Strand 2
A
240 245anti-parallel
Strand 3
A
268 272parallel
Strand 4
A
316 321parallel
Strand 5
A
342 346parallel
Strand 6
A
393 394parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 297first strand
Strand 2
A
305 306anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il