Analysis of interatomic Contacts of Structural Units in PDB entry:
4GJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GJP entry

There are 10 chains in PDB entry 4GJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 230HIS 726
I
 T -2 T 5
I
 G 7 G 7
I
 G 9 T 14
J
 A -14 A 2
B
 GLN 231HIS 723
G
 T -2 T 5
G
 G 7 G 7
G
 G 9 T 12
H
 G -13 A 2
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 4GJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
234 249Right-handed alpha
Helix 2
2
A
256 267Right-handed alpha
Helix 3
3
A
267 284Right-handed alpha
Helix 4
4
A
290 299Right-handed alpha
Helix 5
5
A
302 321Right-handed alpha
Helix 6
6
A
324 333Right-handed alpha
Helix 7
7
A
336 354Right-handed alpha
Helix 8
8
A
358 367Right-handed alpha
Helix 9
9
A
370 388Right-handed alpha
Helix 10
10
A
392 401Right-handed alpha
Helix 11
11
A
404 424Right-handed alpha
Helix 12
12
A
426 435Right-handed alpha
Helix 13
13
A
438 456Right-handed alpha
Helix 14
14
A
460 469Right-handed alpha
Helix 15
15
A
472 492Right-handed alpha
Helix 16
16
A
494 503Right-handed alpha
Helix 17
17
A
506 523Right-handed alpha
Helix 18
18
A
528 537Right-handed alpha
Helix 19
19
A
540 558Right-handed alpha
Helix 20
20
A
562 571Right-handed alpha
Helix 21
21
A
574 592Right-handed alpha
Helix 22
22
A
596 605Right-handed alpha
Helix 23
23
A
608 626Right-handed alpha
Helix 24
24
A
630 639Right-handed alpha
Helix 25
25
A
642 660Right-handed alpha
Helix 26
26
A
664 673Right-handed alpha
Helix 27
27
A
676 690Right-handed alpha
Helix 28
28
A
692 696Right-handed 310
Helix 29
29
A
699 726Right-handed alpha
Helix 30
30
B
236 247Right-handed alpha
Helix 31
31
B
256 267Right-handed alpha
Helix 32
32
B
267 284Right-handed alpha
Helix 33
33
B
290 299Right-handed alpha
Helix 34
34
B
302 322Right-handed alpha
Helix 35
35
B
324 333Right-handed alpha
Helix 36
36
B
336 352Right-handed alpha
Helix 37
37
B
358 367Right-handed alpha
Helix 38
38
B
370 388Right-handed alpha
Helix 39
39
B
392 401Right-handed alpha
Helix 40
40
B
404 420Right-handed alpha
Helix 41
41
B
426 436Right-handed alpha
Helix 42
42
B
438 455Right-handed alpha
Helix 43
43
B
460 469Right-handed alpha
Helix 44
44
B
472 488Right-handed alpha
Helix 45
45
B
494 503Right-handed alpha
Helix 46
46
B
506 525Right-handed alpha
Helix 47
47
B
528 537Right-handed alpha
Helix 48
48
B
540 558Right-handed alpha
Helix 49
49
B
562 571Right-handed alpha
Helix 50
50
B
574 592Right-handed alpha
Helix 51
51
B
596 605Right-handed alpha
Helix 52
52
B
608 626Right-handed alpha
Helix 53
53
B
630 639Right-handed alpha
Helix 54
54
B
642 660Right-handed alpha
Helix 55
55
B
664 673Right-handed alpha
Helix 56
56
B
676 690Right-handed alpha
Helix 57
57
B
699 718Right-handed alpha
Helix 58
58
B
718 723Right-handed alpha
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There are no sheets in PDB entry 4GJP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il