Analysis of interatomic Contacts of Structural Units in PDB entry:
4GJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GJQ entry

There are 2 chains in PDB entry 4GJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8VAL 209
B
 LEU 8VAL 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4GJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 28Right-handed alpha
Helix 2
2
A
29 38Right-handed 310
Helix 3
3
A
39 41Right-handed 310
Helix 4
4
A
42 63Right-handed alpha
Helix 5
5
A
69 82Right-handed alpha
Helix 6
6
A
83 85Right-handed 310
Helix 7
7
A
88 113Right-handed alpha
Helix 8
8
A
124 136Right-handed alpha
Helix 9
9
A
137 140Right-handed 310
Helix 10
10
A
141 153Right-handed alpha
Helix 11
11
A
157 166Right-handed alpha
Helix 12
12
A
172 201Right-handed alpha
Helix 13
13
B
19 28Right-handed alpha
Helix 14
14
B
29 38Right-handed 310
Helix 15
15
B
39 41Right-handed 310
Helix 16
16
B
42 62Right-handed alpha
Helix 17
17
B
69 82Right-handed alpha
Helix 18
18
B
83 85Right-handed 310
Helix 19
19
B
88 113Right-handed alpha
Helix 20
20
B
124 136Right-handed alpha
Helix 21
21
B
137 140Right-handed 310
Helix 22
22
B
141 153Right-handed alpha
Helix 23
23
B
157 167Right-handed alpha
Helix 24
24
B
172 201Right-handed alpha
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There are no sheets in PDB entry 4GJQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il