Analysis of interatomic Contacts of Structural Units in PDB entry:
4GK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GK9 entry

There is 1 chain in PDB entry 4GK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2GLN 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4GK9

There are 2 sheets in PDB entry 4GK9. Click on sheet of interest to get list of strands forming it: A, B,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 17first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
92 99anti-parallel
Strand 4
A
78 84anti-parallel
Strand 5
A
67 73anti-parallel
Strand 6
A
54 61anti-parallel
Strand 7
A
41 47anti-parallel
Strand 8
A
108 114anti-parallel
Strand 9
A
121 128anti-parallel
Strand 10
A
134 140anti-parallel
Strand 11
A
11 17anti-parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 151first strand
Strand 2
A
160 167anti-parallel
Strand 3
A
225 232anti-parallel
Strand 4
A
211 217anti-parallel
Strand 5
A
200 208anti-parallel
Strand 6
A
187 194anti-parallel
Strand 7
A
174 180anti-parallel
Strand 8
A
241 247anti-parallel
Strand 9
A
254 261anti-parallel
Strand 10
A
267 274anti-parallel
Strand 11
A
144 151anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il