Analysis of interatomic Contacts of Structural Units in PDB entry:
4GL2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GL2 entry

There are 2 chains in PDB entry 4GL2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 306LEU 1013
B
 LEU 306GLN 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 4GL2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
309 321Right-handed alpha
Helix 2
2
A
334 354Right-handed alpha
Helix 3
3
A
366 376Right-handed alpha
Helix 4
4
A
376 382Right-handed alpha
Helix 5
5
A
399 406Right-handed alpha
Helix 6
6
A
414 421Right-handed alpha
Helix 7
7
A
433 437Right-handed 310
Helix 8
8
A
445 448Right-handed 310
Helix 9
9
A
456 473Right-handed alpha
Helix 10
10
A
498 514Right-handed alpha
Helix 11
11
A
524 532Right-handed alpha
Helix 12
12
A
550 566Right-handed alpha
Helix 13
13
A
575 593Right-handed alpha
Helix 14
14
A
597 617Right-handed alpha
Helix 15
15
A
618 638Right-handed alpha
Helix 16
16
A
670 692Right-handed alpha
Helix 17
17
A
704 715Right-handed alpha
Helix 18
18
A
727 740Right-handed alpha
Helix 19
19
A
767 779Right-handed alpha
Helix 20
20
A
812 821Right-handed alpha
Helix 21
21
A
840 861Right-handed alpha
Helix 22
22
A
865 884Right-handed alpha
Helix 23
23
A
918 920Right-handed 310
Helix 24
24
A
932 939Right-handed alpha
Helix 25
25
A
1002 1006Right-handed 310
Helix 26
26
B
309 321Right-handed alpha
Helix 27
27
B
334 354Right-handed alpha
Helix 28
28
B
365 376Right-handed alpha
Helix 29
29
B
376 382Right-handed alpha
Helix 30
30
B
399 407Right-handed alpha
Helix 31
31
B
414 421Right-handed alpha
Helix 32
32
B
433 437Right-handed 310
Helix 33
33
B
444 448Right-handed 310
Helix 34
34
B
452 473Right-handed alpha
Helix 35
35
B
498 514Right-handed alpha
Helix 36
36
B
524 532Right-handed alpha
Helix 37
37
B
550 566Right-handed alpha
Helix 38
38
B
575 593Right-handed alpha
Helix 39
39
B
597 617Right-handed alpha
Helix 40
40
B
618 638Right-handed alpha
Helix 41
41
B
670 692Right-handed alpha
Helix 42
42
B
699 715Right-handed alpha
Helix 43
43
B
727 740Right-handed alpha
Helix 44
44
B
767 781Right-handed alpha
Helix 45
45
B
812 821Right-handed alpha
Helix 46
46
B
839 861Right-handed alpha
Helix 47
47
B
865 887Right-handed alpha
Helix 48
48
B
916 920Right-handed 310
Helix 49
49
B
932 939Right-handed alpha
Helix 50
50
B
984 987Right-handed 310
Helix 51
51
B
1002 1006Right-handed 310
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There are 12 sheets in PDB entry 4GL2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
483 487parallel
Strand 3
A
439 443parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 363first strand
Strand 2
A
409 413parallel
Strand 3
A
387 390parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 542first strand
Strand 2
A
829 835parallel
Strand 3
A
805 807parallel
Strand 4
A
721 724parallel
Strand 5
A
787 789parallel
Strand 6
A
752 753parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
913 916first strand
Strand 2
A
903 907anti-parallel
Strand 3
A
987 991anti-parallel
Strand 4
A
996 998anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
921 923first strand
Strand 2
A
927 929anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
940 941first strand
Strand 2
A
959 961anti-parallel
Strand 3
A
967 971anti-parallel
Strand 4
A
980 982anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 328first strand
Strand 2
B
483 488parallel
Strand 3
B
439 442parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
362 363first strand
Strand 2
B
409 413parallel
Strand 3
B
387 390parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
536 540first strand
Strand 2
B
829 833parallel
Strand 3
B
805 807parallel
Strand 4
B
721 724parallel
Strand 5
B
787 790parallel
Strand 6
B
751 753parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
921 923first strand
Strand 2
B
927 929anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
940 941first strand
Strand 2
B
959 961anti-parallel
Strand 3
B
967 971anti-parallel
Strand 4
B
980 982anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
989 990first strand
Strand 2
B
997 998anti-parallel
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