Analysis of interatomic Contacts of Structural Units in PDB entry:
4GL3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GL3 entry

There is 1 chain in PDB entry 4GL3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 35ASN 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4GL3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 53Right-handed alpha
Helix 2
2
A
79 95Right-handed alpha
Helix 3
3
A
99 116Right-handed alpha
Helix 4
4
A
149 166Right-handed alpha
Helix 5
5
A
170 187Right-handed alpha
Helix 6
6
A
188 194Right-handed 310
Helix 7
7
A
221 231Right-handed alpha
Helix 8
8
A
237 244Right-handed alpha
Helix 9
9
A
273 278Right-handed 310
Helix 10
10
A
295 314Right-handed alpha
Helix 11
11
A
350 357Right-handed alpha
Helix 12
12
A
361 375Right-handed alpha
Helix 13
13
A
376 380Right-handed alpha
Helix 14
14
A
402 419Right-handed alpha
Helix 15
15
A
419 427Right-handed alpha
Helix 16
16
A
428 438Right-handed alpha
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There are 6 sheets in PDB entry 4GL3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 78first strand
Strand 2
A
129 131anti-parallel
Strand 3
A
137 138anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
202 203anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 257first strand
Strand 2
A
260 264anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 331first strand
Strand 2
A
338 339anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 382first strand
Strand 2
A
385 386anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
396 397anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il