Analysis of interatomic Contacts of Structural Units in PDB entry:
4GL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GL6 entry

There are 2 chains in PDB entry 4GL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 28LYS 264
B
 GLY 0LYS 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4GL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 42Right-handed alpha
Helix 2
2
A
97 119Right-handed alpha
Helix 3
3
A
131 135Right-handed 310
Helix 4
4
A
138 143Right-handed alpha
Helix 5
5
A
144 153Right-handed alpha
Helix 6
6
A
172 174Right-handed 310
Helix 7
7
A
178 193Right-handed alpha
Helix 8
8
A
206 218Right-handed alpha
Helix 9
9
A
226 234Right-handed alpha
Helix 10
10
A
253 263Right-handed alpha
Helix 11
11
B
0 27Right-handed 310
Helix 12
12
B
28 42Right-handed alpha
Helix 13
13
B
97 119Right-handed alpha
Helix 14
14
B
131 135Right-handed 310
Helix 15
15
B
138 143Right-handed alpha
Helix 16
16
B
144 155Right-handed alpha
Helix 17
17
B
156 159Right-handed 310
Helix 18
18
B
172 174Right-handed 310
Helix 19
19
B
178 193Right-handed alpha
Helix 20
20
B
206 218Right-handed alpha
Helix 21
21
B
226 234Right-handed alpha
Helix 22
22
B
253 263Right-handed alpha
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There are 4 sheets in PDB entry 4GL6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 51first strand
Strand 2
A
63 69anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
92 95anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 127first strand
Strand 2
A
163 170anti-parallel
Strand 3
A
198 205parallel
Strand 4
A
238 243anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 51first strand
Strand 2
B
63 69anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
92 95anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 127first strand
Strand 2
B
161 170anti-parallel
Strand 3
B
197 205parallel
Strand 4
B
238 243anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il