Analysis of interatomic Contacts of Structural Units in PDB entry:
4GLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GLJ entry

There is 1 chain in PDB entry 4GLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11PRO 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4GLJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
66 70Right-handed 310
Helix 2
2
A
72 76Right-handed 310
Helix 3
3
A
77 88Right-handed alpha
Helix 4
4
A
144 158Right-handed alpha
Helix 5
5
A
181 191Right-handed alpha
Helix 6
6
A
199 210Right-handed alpha
Helix 7
7
A
236 264Right-handed alpha
Helix 8
8
A
267 272Right-handed 310
Helix 9
9
A
280 284Right-handed 310
Helix 10
10
A
285 292Right-handed alpha
Helix 11
11
A
293 296Right-handed 310
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There is 1 sheet ( A) in PDB entry 4GLJ.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
49 54anti-parallel
Strand 3
A
57 63anti-parallel
Strand 4
A
16 20parallel
Strand 5
A
92 101parallel
Strand 6
A
213 223parallel
Strand 7
A
111 119anti-parallel
Strand 8
A
165 173parallel
Strand 9
A
195 197parallel
Strand 10
A
92 101anti-parallel
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