Analysis of interatomic Contacts of Structural Units in PDB entry:
4GLL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GLL entry

There are 2 chains in PDB entry 4GLL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 88GLU 394
B
 ARG 88GLN 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4GLL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
98 111Right-handed alpha
Helix 2
2
A
125 133Right-handed 310
Helix 3
3
A
164 171Right-handed alpha
Helix 4
4
A
171 194Right-handed alpha
Helix 5
5
A
204 207Right-handed 310
Helix 6
6
A
228 250Right-handed alpha
Helix 7
7
A
272 283Right-handed alpha
Helix 8
8
A
302 314Right-handed alpha
Helix 9
9
A
331 343Right-handed alpha
Helix 10
10
A
365 373Right-handed alpha
Helix 11
11
A
379 393Right-handed alpha
Helix 12
12
B
98 111Right-handed alpha
Helix 13
13
B
125 133Right-handed 310
Helix 14
14
B
172 180Right-handed alpha
Helix 15
15
B
180 194Right-handed alpha
Helix 16
16
B
204 207Right-handed 310
Helix 17
17
B
228 250Right-handed alpha
Helix 18
18
B
272 283Right-handed alpha
Helix 19
19
B
302 314Right-handed alpha
Helix 20
20
B
331 343Right-handed alpha
Helix 21
21
B
365 373Right-handed alpha
Helix 22
22
B
379 396Right-handed alpha
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There are 8 sheets in PDB entry 4GLL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 142first strand
Strand 2
A
114 119parallel
Strand 3
A
90 94parallel
Strand 4
A
155 158parallel
Strand 5
A
196 202parallel
Strand 6
A
252 258parallel
Strand 7
A
321 323parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
300 301parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 290first strand
Strand 2
A
348 351parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 297first strand
Strand 2
A
329 330anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 142first strand
Strand 2
B
114 119parallel
Strand 3
B
90 94parallel
Strand 4
B
155 158parallel
Strand 5
B
196 202parallel
Strand 6
B
253 258parallel
Strand 7
B
321 323parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 262first strand
Strand 2
B
300 301parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 290first strand
Strand 2
B
348 351parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
296 297first strand
Strand 2
B
329 330anti-parallel
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