Analysis of interatomic Contacts of Structural Units in PDB entry:
4GLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GLT entry

There are 4 chains in PDB entry 4GLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -5ILE 202
B
 SER 0ILE 202
C
 SER 0VAL 201
D
 ASN -5ILE 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4GLT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
39 43Right-handed 310
Helix 3
3
A
62 72Right-handed alpha
Helix 4
4
A
83 112Right-handed alpha
Helix 5
5
A
119 141Right-handed alpha
Helix 6
6
A
153 170Right-handed alpha
Helix 7
7
A
174 179Right-handed alpha
Helix 8
8
A
179 191Right-handed alpha
Helix 9
9
A
192 197Right-handed alpha
Helix 10
10
B
9 22Right-handed alpha
Helix 11
11
B
39 44Right-handed alpha
Helix 12
12
B
62 72Right-handed alpha
Helix 13
13
B
83 112Right-handed alpha
Helix 14
14
B
114 118Right-handed 310
Helix 15
15
B
119 141Right-handed alpha
Helix 16
16
B
153 170Right-handed alpha
Helix 17
17
B
174 179Right-handed alpha
Helix 18
18
B
179 191Right-handed alpha
Helix 19
19
B
192 197Right-handed alpha
Helix 20
20
C
9 23Right-handed alpha
Helix 21
21
C
39 44Right-handed alpha
Helix 22
22
C
62 72Right-handed alpha
Helix 23
23
C
83 112Right-handed alpha
Helix 24
24
C
113 118Right-handed 310
Helix 25
25
C
119 141Right-handed alpha
Helix 26
26
C
153 170Right-handed alpha
Helix 27
27
C
174 179Right-handed alpha
Helix 28
28
C
179 192Right-handed alpha
Helix 29
29
C
192 197Right-handed alpha
Helix 30
30
D
9 22Right-handed alpha
Helix 31
31
D
39 44Right-handed alpha
Helix 32
32
D
62 72Right-handed alpha
Helix 33
33
D
83 113Right-handed alpha
Helix 34
34
D
114 118Right-handed 310
Helix 35
35
D
119 141Right-handed alpha
Helix 36
36
D
153 170Right-handed alpha
Helix 37
37
D
174 179Right-handed alpha
Helix 38
38
D
179 191Right-handed alpha
Helix 39
39
D
192 197Right-handed alpha
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There are 4 sheets in PDB entry 4GLT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
2 5parallel
Strand 3
A
51 53anti-parallel
Strand 4
A
59 60anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 30first strand
Strand 2
B
2 5parallel
Strand 3
B
51 53anti-parallel
Strand 4
B
59 60anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 30first strand
Strand 2
C
1 5parallel
Strand 3
C
51 53anti-parallel
Strand 4
C
59 60anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 30first strand
Strand 2
D
2 5parallel
Strand 3
D
51 53anti-parallel
Strand 4
D
59 60anti-parallel
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