Analysis of interatomic Contacts of Structural Units in PDB entry:
4GLU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GLU entry

There are 24 chains in PDB entry 4GLU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 DIL 76DAR 75
Y
 DLY 77DIL 76
D
 DPR 78DLY 77
P
 DHI 79DPR 78
R
 DGN 80DHI 79
D
 DGN 82GLY 81
H
 DHI 83DGN 82
I
 DIL 84DHI 83
D
 DGL 86GLY 85
G
 MED 87DGL 86
N
 DSN 88MED 87
D
 DPN 89DSN 88
G
 DLE 90DPN 89
N
 DGN 91DLE 90
D
 DHI 92DGN 91
H
 DSG 93DHI 92
I
 DLY 94DSG 93
D
 DCY 95DLY 94
I
 DGL 96DCY 95
L
 DCY 97DGL 96
D
 DAR 98DCY 97
G
 DPR 99DAR 98
L
 DLY 100DPR 99
M
 DAS 102DLY 101
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4GLU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 18Right-handed alpha
Helix 2
2
A
28 32Right-handed alpha
Helix 3
3
A
33 36Right-handed 310
Helix 4
4
D
9 18Right-handed alpha
Helix 5
5
D
28 32Right-handed alpha
Helix 6
6
B
9 18Right-handed alpha
Helix 7
7
B
28 32Right-handed alpha
Helix 8
8
C
9 18Right-handed alpha
Helix 9
9
C
28 32Right-handed alpha
Helix 10
10
E
9 18Right-handed alpha
Helix 11
11
E
28 32Right-handed alpha
Helix 12
12
F
9 18Right-handed alpha
Helix 13
13
F
28 32Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 4GLU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 27first strand
Strand 2
A
44 51anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
59 77anti-parallel
Strand 3
A
81 99anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
20 27first strand
Strand 2
D
44 51anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 41first strand
Strand 2
D
59 77anti-parallel
Strand 3
D
81 99anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 27first strand
Strand 2
B
44 51anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
59 76anti-parallel
Strand 3
B
82 99anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 27first strand
Strand 2
C
44 51anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 41first strand
Strand 2
C
59 77anti-parallel
Strand 3
C
81 99anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
20 27first strand
Strand 2
E
44 51anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
39 41first strand
Strand 2
E
59 77anti-parallel
Strand 3
E
81 99anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
39 41first strand
Strand 2
E
59 77anti-parallel
Strand 3
F
7 8parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
20 27first strand
Strand 2
F
44 51anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
39 41first strand
Strand 2
F
59 76anti-parallel
Strand 3
F
82 99anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il