Analysis of interatomic Contacts of Structural Units in PDB entry:
4GLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GLW entry

There are 2 chains in PDB entry 4GLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ALA 305
B
 ASN 2PRO 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4GLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 7Right-handed alpha
Helix 2
2
A
38 46Right-handed alpha
Helix 3
3
A
47 50Right-handed 310
Helix 4
4
A
54 59Right-handed 310
Helix 5
5
A
84 96Right-handed alpha
Helix 6
6
A
139 144Right-handed alpha
Helix 7
7
A
168 182Right-handed alpha
Helix 8
8
A
189 199Right-handed alpha
Helix 9
9
A
202 209Right-handed alpha
Helix 10
10
A
226 238Right-handed alpha
Helix 11
11
A
250 265Right-handed alpha
Helix 12
12
A
266 268Right-handed 310
Helix 13
13
A
281 289Right-handed alpha
Helix 14
14
B
3 13Right-handed alpha
Helix 15
15
B
37 46Right-handed alpha
Helix 16
16
B
47 50Right-handed 310
Helix 17
17
B
54 59Right-handed 310
Helix 18
18
B
84 97Right-handed alpha
Helix 19
19
B
139 144Right-handed alpha
Helix 20
20
B
168 182Right-handed alpha
Helix 21
21
B
189 200Right-handed alpha
Helix 22
22
B
202 209Right-handed alpha
Helix 23
23
B
226 237Right-handed alpha
Helix 24
24
B
250 265Right-handed alpha
Helix 25
25
B
266 268Right-handed 310
Helix 26
26
B
281 289Right-handed alpha
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There are 6 sheets in PDB entry 4GLW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 71first strand
Strand 2
A
135 138anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
298 302parallel
Strand 3
A
272 279anti-parallel
Strand 4
A
104 110anti-parallel
Strand 5
A
246 248anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 129first strand
Strand 2
A
113 120anti-parallel
Strand 3
A
159 166anti-parallel
Strand 4
A
212 218anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 71first strand
Strand 2
B
135 137anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 82first strand
Strand 2
B
298 301parallel
Strand 3
B
272 279anti-parallel
Strand 4
B
104 110anti-parallel
Strand 5
B
246 248anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 129first strand
Strand 2
B
113 120anti-parallel
Strand 3
B
159 166anti-parallel
Strand 4
B
212 218anti-parallel
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