Analysis of interatomic Contacts of Structural Units in PDB entry:
4GO4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4GO4 entry

There are 8 chains in PDB entry 4GO4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 487
B	MET 1	ARG 487
C	MET 1	ARG 487
D	MET 1	ARG 487
E	MET 1	ARG 487
F	MET 1	ARG 487
G	MET 1	ARG 487
H	MET 1	ARG 487

There are151 helices in PDB entry 4GO4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	38	59	Right-handed alpha
Helix 2	2	A	60	78	Right-handed alpha
Helix 3	3	A	78	91	Right-handed alpha
Helix 4	4	A	93	100	Right-handed alpha
Helix 5	5	A	100	114	Right-handed alpha
Helix 6	6	A	150	165	Right-handed alpha
Helix 7	7	A	178	191	Right-handed alpha
Helix 8	8	A	207	215	Right-handed alpha
Helix 9	9	A	226	238	Right-handed alpha
Helix 10	10	A	261	275	Right-handed alpha
Helix 11	11	A	276	279	Right-handed 310
Helix 12	12	A	291	307	Right-handed alpha
Helix 13	13	A	325	342	Right-handed alpha
Helix 14	14	A	356	360	Right-handed 310
Helix 15	15	A	375	379	Right-handed 310
Helix 16	16	A	394	404	Right-handed alpha
Helix 17	17	A	417	428	Right-handed alpha
Helix 18	18	A	450	454	Right-handed 310
Helix 19	19	A	460	466	Right-handed alpha
Helix 20	20	B	38	59	Right-handed alpha
Helix 21	21	B	60	78	Right-handed alpha
Helix 22	22	B	78	91	Right-handed alpha
Helix 23	23	B	93	100	Right-handed alpha
Helix 24	24	B	100	114	Right-handed alpha
Helix 25	25	B	150	165	Right-handed alpha
Helix 26	26	B	178	191	Right-handed alpha
Helix 27	27	B	207	215	Right-handed alpha
Helix 28	28	B	226	238	Right-handed alpha
Helix 29	29	B	261	275	Right-handed alpha
Helix 30	30	B	276	279	Right-handed 310
Helix 31	31	B	291	307	Right-handed alpha
Helix 32	32	B	325	342	Right-handed alpha
Helix 33	33	B	375	379	Right-handed 310
Helix 34	34	B	394	404	Right-handed alpha
Helix 35	35	B	417	428	Right-handed alpha
Helix 36	36	B	450	454	Right-handed 310
Helix 37	37	B	460	466	Right-handed alpha
Helix 38	38	C	38	59	Right-handed alpha
Helix 39	39	C	60	78	Right-handed alpha
Helix 40	40	C	78	91	Right-handed alpha
Helix 41	41	C	93	100	Right-handed alpha
Helix 42	42	C	100	114	Right-handed alpha
Helix 43	43	C	150	165	Right-handed alpha
Helix 44	44	C	178	191	Right-handed alpha
Helix 45	45	C	207	215	Right-handed alpha
Helix 46	46	C	226	238	Right-handed alpha
Helix 47	47	C	261	275	Right-handed alpha
Helix 48	48	C	276	279	Right-handed 310
Helix 49	49	C	291	307	Right-handed alpha
Helix 50	50	C	325	342	Right-handed alpha
Helix 51	51	C	356	360	Right-handed 310
Helix 52	52	C	375	379	Right-handed 310
Helix 53	53	C	394	404	Right-handed alpha
Helix 54	54	C	417	428	Right-handed alpha
Helix 55	55	C	450	454	Right-handed 310
Helix 56	56	C	460	466	Right-handed alpha
Helix 57	57	D	38	59	Right-handed alpha
Helix 58	58	D	60	78	Right-handed alpha
Helix 59	59	D	78	91	Right-handed alpha
Helix 60	60	D	93	100	Right-handed alpha
Helix 61	61	D	100	114	Right-handed alpha
Helix 62	62	D	150	165	Right-handed alpha
Helix 63	63	D	178	191	Right-handed alpha
Helix 64	64	D	207	215	Right-handed alpha
Helix 65	65	D	226	238	Right-handed alpha
Helix 66	66	D	261	275	Right-handed alpha
Helix 67	67	D	276	279	Right-handed 310
Helix 68	68	D	291	307	Right-handed alpha
Helix 69	69	D	325	342	Right-handed alpha
Helix 70	70	D	356	360	Right-handed 310
Helix 71	71	D	375	379	Right-handed 310
Helix 72	72	D	394	404	Right-handed alpha
Helix 73	73	D	417	428	Right-handed alpha
Helix 74	74	D	450	454	Right-handed 310
Helix 75	75	D	460	466	Right-handed alpha
Helix 76	76	E	38	59	Right-handed alpha
Helix 77	77	E	60	78	Right-handed alpha
Helix 78	78	E	78	91	Right-handed alpha
Helix 79	79	E	93	100	Right-handed alpha
Helix 80	80	E	100	114	Right-handed alpha
Helix 81	81	E	150	165	Right-handed alpha
Helix 82	82	E	178	191	Right-handed alpha
Helix 83	83	E	207	215	Right-handed alpha
Helix 84	84	E	226	238	Right-handed alpha
Helix 85	85	E	261	275	Right-handed alpha
Helix 86	86	E	276	279	Right-handed 310
Helix 87	87	E	291	307	Right-handed alpha
Helix 88	88	E	325	342	Right-handed alpha
Helix 89	89	E	356	360	Right-handed 310
Helix 90	90	E	375	379	Right-handed 310
Helix 91	91	E	394	404	Right-handed alpha
Helix 92	92	E	417	428	Right-handed alpha
Helix 93	93	E	450	454	Right-handed 310
Helix 94	94	E	460	466	Right-handed alpha
Helix 95	95	F	38	59	Right-handed alpha
Helix 96	96	F	60	78	Right-handed alpha
Helix 97	97	F	78	91	Right-handed alpha
Helix 98	98	F	93	98	Right-handed alpha
Helix 99	99	F	102	114	Right-handed alpha
Helix 100	100	F	150	165	Right-handed alpha
Helix 101	101	F	178	191	Right-handed alpha
Helix 102	102	F	207	215	Right-handed alpha
Helix 103	103	F	226	238	Right-handed alpha
Helix 104	104	F	261	275	Right-handed alpha
Helix 105	105	F	276	279	Right-handed 310
Helix 106	106	F	291	307	Right-handed alpha
Helix 107	107	F	325	342	Right-handed alpha
Helix 108	108	F	356	360	Right-handed 310
Helix 109	109	F	375	379	Right-handed 310
Helix 110	110	F	394	404	Right-handed alpha
Helix 111	111	F	417	428	Right-handed alpha
Helix 112	112	F	450	454	Right-handed 310
Helix 113	113	F	460	466	Right-handed alpha
Helix 114	114	G	38	59	Right-handed alpha
Helix 115	115	G	60	78	Right-handed alpha
Helix 116	116	G	78	91	Right-handed alpha
Helix 117	117	G	93	100	Right-handed alpha
Helix 118	118	G	100	114	Right-handed alpha
Helix 119	119	G	150	165	Right-handed alpha
Helix 120	120	G	178	191	Right-handed alpha
Helix 121	121	G	207	215	Right-handed alpha
Helix 122	122	G	226	238	Right-handed alpha
Helix 123	123	G	261	275	Right-handed alpha
Helix 124	124	G	276	279	Right-handed 310
Helix 125	125	G	291	307	Right-handed alpha
Helix 126	126	G	325	342	Right-handed alpha
Helix 127	127	G	356	360	Right-handed 310
Helix 128	128	G	375	379	Right-handed 310
Helix 129	129	G	394	404	Right-handed alpha
Helix 130	130	G	417	428	Right-handed alpha
Helix 131	131	G	450	452	Right-handed 310
Helix 132	132	G	460	466	Right-handed alpha
Helix 133	133	H	38	59	Right-handed alpha
Helix 134	134	H	60	78	Right-handed alpha
Helix 135	135	H	78	91	Right-handed alpha
Helix 136	136	H	93	100	Right-handed alpha
Helix 137	137	H	100	116	Right-handed alpha
Helix 138	138	H	150	165	Right-handed alpha
Helix 139	139	H	178	191	Right-handed alpha
Helix 140	140	H	207	215	Right-handed alpha
Helix 141	141	H	226	238	Right-handed alpha
Helix 142	142	H	261	275	Right-handed alpha
Helix 143	143	H	276	279	Right-handed 310
Helix 144	144	H	291	307	Right-handed alpha
Helix 145	145	H	325	342	Right-handed alpha
Helix 146	146	H	356	360	Right-handed 310
Helix 147	147	H	375	379	Right-handed 310
Helix 148	148	H	394	404	Right-handed alpha
Helix 149	149	H	417	428	Right-handed alpha
Helix 150	150	H	450	452	Right-handed 310
Helix 151	151	H	460	466	Right-handed alpha

There are 32 sheets in PDB entry 4GO4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	7	first strand
Strand 2	A	10	12	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	23	first strand
Strand 2	A	30	35	anti-parallel

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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	124	first strand
Strand 2	A	130	137	anti-parallel
Strand 3	A	469	476	anti-parallel
Strand 4	B	432	435	parallel
Strand 5	B	411	414	parallel
Strand 6	B	253	256	parallel
Strand 7	B	286	290	parallel
Strand 8	B	386	392	parallel
Strand 9	B	367	370	parallel
Strand 10	B	345	348	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	200	first strand
Strand 2	A	168	172	parallel
Strand 3	A	141	145	parallel
Strand 4	A	220	225	parallel
Strand 5	A	243	248	parallel

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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	348	first strand
Strand 2	A	367	370	anti-parallel
Strand 3	A	386	392	parallel
Strand 4	A	286	290	parallel
Strand 5	A	253	256	parallel
Strand 6	A	411	414	parallel
Strand 7	A	432	435	parallel
Strand 8	B	469	476	parallel
Strand 9	B	130	137	anti-parallel
Strand 10	B	122	124	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	7	first strand
Strand 2	B	10	12	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	23	first strand
Strand 2	B	30	35	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	200	first strand
Strand 2	B	168	172	parallel
Strand 3	B	141	145	parallel
Strand 4	B	220	224	parallel
Strand 5	B	243	247	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	7	first strand
Strand 2	C	10	12	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	23	first strand
Strand 2	C	30	35	anti-parallel

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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	122	124	first strand
Strand 2	C	130	137	anti-parallel
Strand 3	C	469	476	anti-parallel
Strand 4	D	432	435	parallel
Strand 5	D	411	414	parallel
Strand 6	D	252	256	parallel
Strand 7	D	284	290	parallel
Strand 8	D	386	392	parallel
Strand 9	D	367	370	parallel
Strand 10	D	345	348	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	200	first strand
Strand 2	C	168	172	parallel
Strand 3	C	141	145	parallel
Strand 4	C	220	224	parallel
Strand 5	C	243	247	parallel

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There are 10 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	348	first strand
Strand 2	C	367	370	anti-parallel
Strand 3	C	386	392	parallel
Strand 4	C	286	290	parallel
Strand 5	C	253	256	parallel
Strand 6	C	411	414	parallel
Strand 7	C	432	435	parallel
Strand 8	D	469	476	parallel
Strand 9	D	130	137	anti-parallel
Strand 10	D	122	124	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	7	first strand
Strand 2	D	10	12	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	23	first strand
Strand 2	D	30	35	anti-parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	200	first strand
Strand 2	D	168	172	parallel
Strand 3	D	141	145	parallel
Strand 4	D	220	224	parallel
Strand 5	D	243	247	parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	7	first strand
Strand 2	E	10	12	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	23	first strand
Strand 2	E	30	35	anti-parallel

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There are 10 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	122	124	first strand
Strand 2	E	130	137	anti-parallel
Strand 3	E	469	476	anti-parallel
Strand 4	F	432	435	parallel
Strand 5	F	411	414	parallel
Strand 6	F	252	256	parallel
Strand 7	F	284	290	parallel
Strand 8	F	386	392	parallel
Strand 9	F	367	370	parallel
Strand 10	F	345	348	anti-parallel

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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	198	200	first strand
Strand 2	E	168	172	parallel
Strand 3	E	141	145	parallel
Strand 4	E	218	225	parallel
Strand 5	E	243	248	parallel

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There are 10 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	345	348	first strand
Strand 2	E	367	370	anti-parallel
Strand 3	E	386	392	parallel
Strand 4	E	286	290	parallel
Strand 5	E	253	256	parallel
Strand 6	E	411	414	parallel
Strand 7	E	432	435	parallel
Strand 8	F	469	476	parallel
Strand 9	F	130	137	anti-parallel
Strand 10	F	122	124	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	7	first strand
Strand 2	F	10	12	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	23	first strand
Strand 2	F	30	35	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	198	200	first strand
Strand 2	F	168	172	parallel
Strand 3	F	141	145	parallel
Strand 4	F	220	225	parallel
Strand 5	F	243	248	parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	7	first strand
Strand 2	G	10	12	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	23	first strand
Strand 2	G	30	35	anti-parallel

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There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	122	124	first strand
Strand 2	G	130	137	anti-parallel
Strand 3	G	469	476	anti-parallel
Strand 4	H	432	435	parallel
Strand 5	H	412	414	parallel
Strand 6	H	253	256	parallel
Strand 7	H	286	290	parallel
Strand 8	H	386	392	parallel
Strand 9	H	367	370	parallel
Strand 10	H	345	348	anti-parallel

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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	198	200	first strand
Strand 2	G	168	172	parallel
Strand 3	G	141	145	parallel
Strand 4	G	220	224	parallel
Strand 5	G	243	247	parallel
Strand 6	G	454	455	anti-parallel

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There are 10 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	345	348	first strand
Strand 2	G	367	370	anti-parallel
Strand 3	G	386	392	parallel
Strand 4	G	286	290	parallel
Strand 5	G	253	256	parallel
Strand 6	G	411	414	parallel
Strand 7	G	432	435	parallel
Strand 8	H	469	476	parallel
Strand 9	H	130	137	anti-parallel
Strand 10	H	122	124	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	7	first strand
Strand 2	H	10	12	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	23	first strand
Strand 2	H	30	35	anti-parallel

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There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	198	200	first strand
Strand 2	H	168	172	parallel
Strand 3	H	141	145	parallel
Strand 4	H	218	224	parallel
Strand 5	H	243	247	parallel
Strand 6	H	454	455	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4GO4

Analysis of interatomic Contacts of Structural Units in PDB entry:
4GO4