Analysis of interatomic Contacts of Structural Units in PDB entry:
4GP2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GP2 entry

There are 2 chains in PDB entry 4GP2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 3SER 344
B
 ASP 4LEU 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 4GP2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 27Right-handed alpha
Helix 2
2
A
30 32Right-handed 310
Helix 3
3
A
33 43Right-handed alpha
Helix 4
4
A
47 62Right-handed alpha
Helix 5
5
A
64 66Right-handed 310
Helix 6
6
A
67 89Right-handed alpha
Helix 7
7
A
99 105Right-handed alpha
Helix 8
8
A
105 126Right-handed alpha
Helix 9
9
A
129 154Right-handed alpha
Helix 10
10
A
161 167Right-handed alpha
Helix 11
11
A
173 185Right-handed alpha
Helix 12
12
A
185 199Right-handed alpha
Helix 13
13
A
203 232Right-handed alpha
Helix 14
14
A
242 247Right-handed alpha
Helix 15
15
A
252 262Right-handed alpha
Helix 16
16
A
263 275Right-handed alpha
Helix 17
17
A
280 294Right-handed alpha
Helix 18
18
A
295 316Right-handed alpha
Helix 19
19
A
321 332Right-handed alpha
Helix 20
20
A
333 342Right-handed alpha
Helix 21
21
B
5 27Right-handed alpha
Helix 22
22
B
30 32Right-handed 310
Helix 23
23
B
33 40Right-handed alpha
Helix 24
24
B
41 43Right-handed 310
Helix 25
25
B
47 62Right-handed alpha
Helix 26
26
B
64 66Right-handed 310
Helix 27
27
B
67 89Right-handed alpha
Helix 28
28
B
99 105Right-handed alpha
Helix 29
29
B
105 126Right-handed alpha
Helix 30
30
B
129 154Right-handed alpha
Helix 31
31
B
161 167Right-handed alpha
Helix 32
32
B
173 185Right-handed alpha
Helix 33
33
B
185 201Right-handed alpha
Helix 34
34
B
203 232Right-handed alpha
Helix 35
35
B
242 247Right-handed alpha
Helix 36
36
B
252 262Right-handed alpha
Helix 37
37
B
263 275Right-handed alpha
Helix 38
38
B
280 293Right-handed alpha
Helix 39
39
B
295 316Right-handed alpha
Helix 40
40
B
321 332Right-handed alpha
Helix 41
41
B
333 340Right-handed alpha
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There are 2 sheets in PDB entry 4GP2. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
97 98anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
97 98anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il