Analysis of interatomic Contacts of Structural Units in PDB entry:
4GPH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GPH entry

There are 3 chains in PDB entry 4GPH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5LYS 213
B
 GLY 307LEU 515
C
 THR 603GLY 814
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 4GPH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 16Right-handed alpha
Helix 2
2
A
16 25Right-handed alpha
Helix 3
3
A
26 34Right-handed alpha
Helix 4
4
A
38 66Right-handed alpha
Helix 5
5
A
74 78Right-handed 310
Helix 6
6
A
79 92Right-handed alpha
Helix 7
7
A
95 100Right-handed alpha
Helix 8
8
A
103 120Right-handed alpha
Helix 9
9
A
121 139Right-handed alpha
Helix 10
10
A
139 152Right-handed alpha
Helix 11
11
A
154 157Right-handed 310
Helix 12
12
A
158 163Right-handed alpha
Helix 13
13
A
168 183Right-handed alpha
Helix 14
14
A
186 213Right-handed alpha
Helix 15
15
B
308 316Right-handed alpha
Helix 16
16
B
316 325Right-handed alpha
Helix 17
17
B
326 334Right-handed alpha
Helix 18
18
B
338 366Right-handed alpha
Helix 19
19
B
374 378Right-handed 310
Helix 20
20
B
379 392Right-handed alpha
Helix 21
21
B
394 399Right-handed 310
Helix 22
22
B
403 420Right-handed alpha
Helix 23
23
B
421 452Right-handed alpha
Helix 24
24
B
454 462Right-handed 310
Helix 25
25
B
468 483Right-handed alpha
Helix 26
26
B
486 514Right-handed alpha
Helix 27
27
C
607 616Right-handed alpha
Helix 28
28
C
616 625Right-handed alpha
Helix 29
29
C
626 634Right-handed alpha
Helix 30
30
C
638 666Right-handed alpha
Helix 31
31
C
674 678Right-handed 310
Helix 32
32
C
679 692Right-handed alpha
Helix 33
33
C
694 699Right-handed 310
Helix 34
34
C
703 720Right-handed alpha
Helix 35
35
C
721 752Right-handed alpha
Helix 36
36
C
754 762Right-handed 310
Helix 37
37
C
768 782Right-handed alpha
Helix 38
38
C
786 813Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4GPH
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il