Analysis of interatomic Contacts of Structural Units in PDB entry:
4GT1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GT1 entry

There is 1 chain in PDB entry 4GT1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 10ASP 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4GT1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 21Right-handed alpha
Helix 2
2
A
24 35Right-handed alpha
Helix 3
3
A
37 52Right-handed alpha
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
70 85Right-handed alpha
Helix 6
6
A
113 117Right-handed alpha
Helix 7
7
A
132 149Right-handed alpha
Helix 8
8
A
163 170Right-handed alpha
Helix 9
9
A
194 198Right-handed 310
Helix 10
10
A
207 209Right-handed 310
Helix 11
11
A
210 229Right-handed alpha
Helix 12
12
A
243 247Right-handed 310
Helix 13
13
A
249 267Right-handed alpha
Helix 14
14
A
268 296Right-handed alpha
Helix 15
15
A
297 313Right-handed alpha
Helix 16
16
A
317 332Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4GT1.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
89 94parallel
Strand 3
A
153 158parallel
Strand 4
A
59 64parallel
Strand 5
A
174 180parallel
Strand 6
A
200 204parallel
Strand 7
A
239 241parallel
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