Analysis of interatomic Contacts of Structural Units in PDB entry:
4GTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GTF entry

There is 1 chain in PDB entry 4GTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4GTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 28Right-handed alpha
Helix 2
2
A
29 32Right-handed 310
Helix 3
3
A
37 51Right-handed alpha
Helix 4
4
A
54 59Right-handed 310
Helix 5
5
A
70 77Right-handed alpha
Helix 6
6
A
102 107Right-handed 310
Helix 7
7
A
114 139Right-handed alpha
Helix 8
8
A
142 147Right-handed alpha
Helix 9
9
A
148 150Right-handed 310
Helix 10
10
A
164 175Right-handed alpha
Helix 11
11
A
180 198Right-handed alpha
Helix 12
12
A
198 209Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4GTF.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
9 17anti-parallel
Strand 3
A
61 69anti-parallel
Strand 4
A
155 163anti-parallel
Strand 5
A
83 86anti-parallel
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