Analysis of interatomic Contacts of Structural Units in PDB entry:
4GUR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GUR entry

There are 3 chains in PDB entry 4GUR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 51PHE 822
B
 ASP 214THR 225
C
 ALA 1LEU 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 4GUR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
93 101Right-handed alpha
Helix 2
2
A
106 120Right-handed alpha
Helix 3
3
A
126 135Right-handed alpha
Helix 4
4
A
160 167Right-handed alpha
Helix 5
5
A
183 187Right-handed 310
Helix 6
6
A
193 197Right-handed 310
Helix 7
7
A
198 204Right-handed alpha
Helix 8
8
A
216 221Right-handed 310
Helix 9
9
A
224 229Right-handed 310
Helix 10
10
A
290 297Right-handed alpha
Helix 11
11
A
298 301Right-handed 310
Helix 12
12
A
304 321Right-handed alpha
Helix 13
13
A
327 332Right-handed alpha
Helix 14
14
A
333 335Right-handed 310
Helix 15
15
A
340 359Right-handed alpha
Helix 16
16
A
377 381Right-handed 310
Helix 17
17
A
391 405Right-handed alpha
Helix 18
18
A
445 455Right-handed alpha
Helix 19
19
A
476 498Right-handed alpha
Helix 20
20
A
502 506Right-handed 310
Helix 21
21
A
508 524Right-handed alpha
Helix 22
22
A
529 548Right-handed alpha
Helix 23
23
A
560 565Right-handed 310
Helix 24
24
A
579 588Right-handed alpha
Helix 25
25
A
628 634Right-handed alpha
Helix 26
26
A
644 653Right-handed alpha
Helix 27
27
A
671 676Right-handed alpha
Helix 28
28
A
687 691Right-handed 310
Helix 29
29
A
715 720Right-handed alpha
Helix 30
30
A
725 741Right-handed alpha
Helix 31
31
A
756 760Right-handed 310
Helix 32
32
A
776 784Right-handed alpha
Helix 33
33
A
794 798Right-handed 310
Helix 34
34
A
804 822Right-handed alpha
Helix 35
35
B
219 223Right-handed 310
Helix 36
36
C
1 5Right-handed 310
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There are 8 sheets in PDB entry 4GUR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
90 92anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 141first strand
Strand 2
A
150 152anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 593first strand
Strand 2
A
407 411parallel
Strand 3
A
384 388parallel
Strand 4
A
622 625parallel
Strand 5
A
790 792parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
432 433anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
572 574anti-parallel
Strand 3
A
459 460anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 468first strand
Strand 2
A
680 683parallel
Strand 3
A
693 699anti-parallel
Strand 4
A
708 713anti-parallel
Strand 5
A
660 665anti-parallel
Strand 6
A
751 754anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 620first strand
Strand 2
A
608 612anti-parallel
Strand 3
A
598 602anti-parallel
Strand 4
A
638 640parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
654 657first strand
Strand 2
A
767 770anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il